ggKbase home page

MPJ_scaffold_43

Alias: MPJ_Methanosaeta_harundinacea_57_690_3

Search features with annotation key words

Displaying items 1-30 of 109 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_43_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)
MPJ_scaffold_43_2
unknown

Not on your lists

74..328
DNA (255bp) protein (85aa)
MPJ_scaffold_43_3
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(593..1540)
DNA (948bp) protein (316aa)
nucleoside recognition domain-containing protein
Nucleoside recognition domain protein {ECO:0000313|EMBL:AEB68680.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methano
Nucleoside recognition domain protein
MPJ_scaffold_43_4
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1872..2984
DNA (1113bp) protein (371aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AET63775.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosa
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
MPJ_scaffold_43_5
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3583..4434
DNA (852bp) protein (284aa)
TPR-repeat-containing protein rbh
TPR-repeat protein {ECO:0000313|EMBL:AEB69713.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (str
TPR-repeat protein
MPJ_scaffold_43_6
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(4845..5408)
DNA (564bp) protein (188aa)
30S ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanos
30S ribosomal protein S7
MPJ_scaffold_43_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(5413..5841)
DNA (429bp) protein (143aa)
rps12P; 30S ribosomal protein S12P
30S ribosomal protein S12
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
MPJ_scaffold_43_8
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5947..6384)
DNA (438bp) protein (146aa)
Transcription termination factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
Transcription termination factor NusA
MPJ_scaffold_43_9
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6371..6682)
DNA (312bp) protein (104aa)
50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta
50S ribosomal protein L30e
MPJ_scaffold_43_10
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6692..7828)
DNA (1137bp) protein (379aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcina
DNA-directed RNA polymerase subunit A'' rbh
DNA-directed RNA polymerase subunit A''
MPJ_scaffold_43_11
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7825..10389)
DNA (2565bp) protein (855aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaet
DNA-directed RNA polymerase subunit A' rbh
DNA-directed RNA polymerase
MPJ_scaffold_43_12
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10464..12278)
DNA (1815bp) protein (605aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaet
DNA-directed RNA polymerase subunit B' rbh
DNA-directed RNA polymerase
MPJ_scaffold_43_13
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12271..13761)
DNA (1491bp) protein (497aa)
DNA-directed RNA polymerase, subunit B' rbh
DNA-directed RNA polymerase, subunit B {ECO:0000313|EMBL:AET63767.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Metha
DNA-directed RNA polymerase, subunit B
MPJ_scaffold_43_14
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13777..14073)
DNA (297bp) protein (99aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=301375 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
DNA-directed RNA polymerase subunit H
DNA-directed RNA polymerase subunit H
MPJ_scaffold_43_15
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14205..15332)
DNA (1128bp) protein (376aa)
3-isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:AET63765.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta
3-isopropylmalate dehydrogenase
MPJ_scaffold_43_16
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15329..15817)
DNA (489bp) protein (163aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit
3-isopropylmalate dehydratase small subunit
MPJ_scaffold_43_17
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15990..16379
DNA (390bp) protein (130aa)
Tungsten formylmethanofuran dehydrogenase, subunit D
Tungsten formylmethanofuran dehydrogenase, subunit D {ECO:0000313|EMBL:AET63763.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
Tungsten formylmethanofuran dehydrogenase, subunit D
MPJ_scaffold_43_18
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16376..17668
DNA (1293bp) protein (431aa)
Tungsten formylmethanofuran dehydrogenase, subunit B rbh
Tungsten formylmethanofuran dehydrogenase, subunit B {ECO:0000313|EMBL:AET63762.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
Tungsten formylmethanofuran dehydrogenase, subunit B
MPJ_scaffold_43_19
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17658..19343
DNA (1686bp) protein (562aa)
Tungsten formylmethanofuran dehydrogenase, subunit A {ECO:0000313|EMBL:AET63761.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
Tungsten formylmethanofuran dehydrogenase, subunit A rbh
Tungsten formylmethanofuran dehydrogenase, subunit A
MPJ_scaffold_43_20
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19344..20123
DNA (780bp) protein (260aa)
Tungsten formylmethanofuran dehydrogenase, subunit C rbh
Tungsten formylmethanofuran dehydrogenase, subunit C {ECO:0000313|EMBL:AET63760.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
Tungsten formylmethanofuran dehydrogenase, subunit C
MPJ_scaffold_43_21
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20194..21336
DNA (1143bp) protein (381aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET63759.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_43_22
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21403..21825
DNA (423bp) protein (141aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET63758.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_43_23
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21822..22310
DNA (489bp) protein (163aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET63757.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_43_24
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22422..22697)
DNA (276bp) protein (92aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET63756.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
Uncharacterized protein
MPJ_scaffold_43_25
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22805..23293)
DNA (489bp) protein (163aa)
Histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AET63755.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta h
Histidine triad (HIT) protein
MPJ_scaffold_43_26
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23290..23913)
DNA (624bp) protein (208aa)
Phosphoribosylglycinamide formyltransferase
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:AET63754.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="
Phosphoribosylglycinamide formyltransferase
MPJ_scaffold_43_27
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23942..24211)
DNA (270bp) protein (90aa)
DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaet
DNA/RNA-binding protein Alba
MPJ_scaffold_43_28
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24288..24866)
DNA (579bp) protein (193aa)
Mn2+-dependent serine/threonine protein kinase rbh
Mn2+-dependent serine/threonine protein kinase {ECO:0000313|EMBL:AET63752.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sourc
Mn2+-dependent serine/threonine protein kinase
MPJ_scaffold_43_29
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24871..25914)
DNA (1044bp) protein (348aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB68578.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii
Uncharacterized protein
MPJ_scaffold_43_30
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25998..26474
DNA (477bp) protein (159aa)
Molybdenum cofactor synthesis domain protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:AET63750.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source=
Molybdenum cofactor synthesis domain protein
Displaying items 1-30 of 109 in total

View Taxonomy