ggKbase home page

MPJ_scaffold_216

Alias: MPJ_Clostrida_33_93_6

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_216_1

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
Marine sediment metagenome DNA, contig: S01H4_S21051 {ECO:0000313|EMBL:GAH08343.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MPJ_scaffold_216_2

Not on your lists

comp(122..811)
DNA (690bp) protein (230aa)
Marine sediment metagenome DNA, contig: S03H2_C01935 {ECO:0000313|EMBL:GAH22346.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Vitamin B12 dependent methionine synthase activation subunit
Vitamin B12 dependent methionine synthase activation region
MPJ_scaffold_216_3
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(867..1751)
DNA (885bp) protein (295aa)
methylenetetrahydrofolate reductase Tax=CG_OP9-01
5,10-methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase
MPJ_scaffold_216_4

Not on your lists

comp(1812..2612)
DNA (801bp) protein (267aa)
Marine sediment metagenome DNA, contig: S01H4_C00185 {ECO:0000313|EMBL:GAG66943.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
dihydropteroate synthase DHPS
Dihydropteroate synthase DHPS
MPJ_scaffold_216_5

Not on your lists

comp(2631..3269)
DNA (639bp) protein (213aa)
Marine sediment metagenome DNA, contig: S03H2_C01029 {ECO:0000313|EMBL:GAH28210.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
methyltransferase cognate corrinoid protein
Methyltransferase cognate corrinoid protein
MPJ_scaffold_216_6

Not on your lists

comp(3468..4283)
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Marine sediment metagenome DNA, contig: S03H2_C00509 {ECO:0000313|EMBL:GAH21528.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Pyrroline-5-carboxylate reductase
MPJ_scaffold_216_7

Not on your lists

comp(4308..5057)
DNA (750bp) protein (250aa)
Marine sediment metagenome DNA, contig: S01H4_C02191 {ECO:0000313|EMBL:GAG57818.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ApbE family lipoprotein
ApbE family lipoprotein
MPJ_scaffold_216_8

Not on your lists

comp(5144..5551)
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S01H4_C00737 {ECO:0000313|EMBL:GAG74526.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NIL domain-containing protein
NIL domain protein
MPJ_scaffold_216_9
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5823..6983)
DNA (1161bp) protein (387aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
UPI0001E2E747 related cluster
MPJ_scaffold_216_10

Not on your lists

comp(7083..8660)
DNA (1578bp) protein (526aa)
Marine sediment metagenome DNA, contig: S03H2_C01080 {ECO:0000313|EMBL:GAH28903.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2-isopropylmalate synthase
Isopropylmalate/homocitrate/citramalate synthases
MPJ_scaffold_216_11

Not on your lists

comp(8926..10464)
DNA (1539bp) protein (513aa)
Marine sediment metagenome DNA, contig: S03H2_C00612 {ECO:0000313|EMBL:GAH22863.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2-isopropylmalate synthase
2-isopropylmalate synthase
MPJ_scaffold_216_12
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(10587..11414)
DNA (828bp) protein (276aa)
pheA; prephenate dehydratase (EC:4.2.1.51) Tax=CG_OP9-01
pheA; prephenate dehydratase (EC:4.2.1.51)
Putative prephenate dehydratase
MPJ_scaffold_216_13
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(11700..12695)
DNA (996bp) protein (332aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=CG_OP9-01
ketol-acid reductoisomerase
Ketol-acid reductoisomerase
MPJ_scaffold_216_14

Not on your lists

comp(12802..13314)
DNA (513bp) protein (171aa)
Marine sediment metagenome DNA, contig: S01H4_C00380 {ECO:0000313|EMBL:GAG71553.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
acetolactate synthase small subunit
Acetolactate synthase, small subunit
MPJ_scaffold_216_15
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(13317..14987)
DNA (1671bp) protein (557aa)
acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=CG_OP9-01
acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase
MPJ_scaffold_216_16
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(15668..17329)
DNA (1662bp) protein (554aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=CG_OP9-01
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase
MPJ_scaffold_216_17
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(17606..18604)
DNA (999bp) protein (333aa)
isocitrate/isopropylmalate dehydrogenase; K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=CG_OP9-01
isocitrate dehydrogenase (nad(+)) (EC:1.1.1.41)
Isocitrate dehydrogenase (NAD(+))
MPJ_scaffold_216_18
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(18899..20821)
DNA (1923bp) protein (641aa)
aconitate hydratase; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=CG_OP9-01
aconitate hydratase
Aconitate hydratase
MPJ_scaffold_216_19
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(20844..22259)
DNA (1416bp) protein (472aa)
pyruvate carboxyltransferase Tax=CG_OP9-01
pyruvate carboxyltransferase
Pyruvate carboxyltransferase
MPJ_scaffold_216_20
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(22331..23632)
DNA (1302bp) protein (434aa)
glutamate dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2] Tax=CG_OP9-01
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase
MPJ_scaffold_216_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(23914..24618)
DNA (705bp) protein (235aa)
antitermination regulatory protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
antitermination regulatory protein
Predicted antitermination regulatory protein, ANTAR and GAF domain
MPJ_scaffold_216_22
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25034..26605)
DNA (1572bp) protein (524aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR96260.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
MPJ_scaffold_216_23

Not on your lists

comp(26686..27564)
DNA (879bp) protein (293aa)
Marine sediment metagenome DNA, contig: S03H2_C00437 {ECO:0000313|EMBL:GAH20663.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPJ_scaffold_216_24
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(27605..27754)
DNA (150bp) protein (50aa)
glutamate synthase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] Tax=CG_OP9-01
Sulfide dehydrogenase (Flavoprotein) subunit SudA
Displaying 24 items

View Taxonomy