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MPJ_scaffold_5271

Alias: MPJ_OD1_32_582_53

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_5271_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

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comp(1..216)
DNA (216bp) protein (72aa)
DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Lig; NAD-dependent DNA ligase
DNA ligase alias=gwe2_scaffold_23_41 id=1899005 tax=GWE2_OD1_38_254 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
MPJ_scaffold_5271_2

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comp(216..587)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91784.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MPJ_scaffold_5271_3
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

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comp(584..1129)
DNA (546bp) protein (182aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
Uncharacterized protein
MPJ_scaffold_5271_4
CG_CPR03_01, CG_CPR03, Bacteria

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comp(1126..1617)
DNA (492bp) protein (164aa)
hypothetical protein Tax=CG_CPR03_01
Type 4 fimbrial biogenesis protein PilV alias=gwe2_scaffold_218_12 id=1888995 tax=GWE2_OD1_38_254 species=Pseudomonas stutzeri A1501 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
MPJ_scaffold_5271_5

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comp(1614..2138)
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91781.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Tfp pilus assembly protein FimT
MPJ_scaffold_5271_6
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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comp(2140..2880)
DNA (741bp) protein (247aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
pilD; type IV prepilin peptidase
Prepilin peptidase
MPJ_scaffold_5271_7
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

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comp(2929..3609)
DNA (681bp) protein (227aa)
pilin polypeptide Tax=RIFOXYD1_FULL_OD1_44_32_curated
Putative uncharacterized protein alias=RAAC4_OD1_433 id=5227295 tax=RAAC4_OD1
MPJ_scaffold_5271_8
unknown

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comp(3628..3879)
DNA (252bp) protein (84aa)
MPJ_scaffold_5271_9
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(3828..4154)
DNA (327bp) protein (109aa)
type IV pilin; K02653 type IV pilus assembly protein PilC Tax=RBG_13_RIF_OD1_07_42_11_curated
secretion system protein
General secretory pathway protein F
Displaying 9 items

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