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MPJ_scaffold_249

Alias: MPJ_WS6_36_22_1

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_249_1
GWE1_WS6_36_69, WS6, Bacteria

Not on your lists

1..1566
DNA (1566bp) protein (522aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ10980.1}; TaxID=1619094 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_36_69.;"
hypothetical protein
hypothetical protein cdiviTM7_00321 alias=gwe1_scaffold_962_11 id=5100644 tax=WS6_GWE1_33_547 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_2
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

1623..2813
DNA (1191bp) protein (397aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP91990.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
MPJ_scaffold_249_3
GWF1_WS6_35_23_partial, WS6, Bacteria

Not on your lists

2815..4242
DNA (1428bp) protein (476aa)
polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] alias=gwc1_scaffold_103_37 id=5099681 tax=WS6_GWC1_33_22 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_desc=RuBisCO project
PolyA polymerase {ECO:0000313|EMBL:KKP75965.1}; TaxID=1619097 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_35_23.;"
polyA polymerase family protein
MPJ_scaffold_249_4
GWE1_WS6_34_7, WS6, Bacteria

Not on your lists

4307..5719
DNA (1413bp) protein (471aa)
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:KKP64594.1}; TaxID=1619093 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_34_7.;"
RNA-metabolising metallo-beta-lactamase
UPI0002481C02 related cluster alias=gwc1_scaffold_103_36 id=5099680 tax=WS6_GWC1_33_22 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project
MPJ_scaffold_249_5
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

5743..6690
DNA (948bp) protein (316aa)
Translation initiation factor, aIF-2BII family {ECO:0000313|EMBL:KKQ10893.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
hypothetical protein
translation initiation factor IF-2B subunit delta; K03680 translation initiation factor eIF-2B subunit delta alias=gwc1_scaffold_103_35 id=5099679 tax=WS6_GWC1_33_22 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=RuBisCO project
MPJ_scaffold_249_6
GWF1_WS6_35_23_partial, WS6, Bacteria

Not on your lists

6710..8221
DNA (1512bp) protein (504aa)
deoA-1; thymidine phosphorylase (EC:2.4.2.4)
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] alias=gwc1_scaffold_103_34 id=5099678 tax=WS6_GWC1_33_22 species=unknown genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota organism_desc=RuBisCO project
Uncharacterized protein {ECO:0000313|EMBL:KKP75537.1}; TaxID=1619097 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_35_23.;"
MPJ_scaffold_249_7
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(8214..10094)
DNA (1881bp) protein (627aa)
Transglutaminase domain-containing protein {ECO:0000313|EMBL:KKP90455.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
transglutaminase domain-containing protein
transglutaminase-like family protein alias=gwe2_scaffold_770_78 id=5085726 tax=GWE2_WS6_33_161 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria organism_desc=RuBisCO project
MPJ_scaffold_249_8
GWF1_WS6_35_23_partial, WS6, Bacteria

Not on your lists

10196..11305
DNA (1110bp) protein (370aa)
GTP-binding protein YchF {ECO:0000313|EMBL:KKP75541.1}; TaxID=1619097 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_35_23.;"
GTP-binding protein YchF
GTP-binding protein YchF; K06942 alias=gwc1_scaffold_103_32 id=5099676 tax=WS6_GWC1_33_22 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
MPJ_scaffold_249_9
RIFOXYB1_FULL_WS6_33_14_curated, Dojkabacteria, Bacteria

Not on your lists


11475..11822
DNA (348bp) protein (116aa)
30S ribosomal protein S6 Tax=RIFOXYB1_FULL_WS6_33_14_curated
30S ribosomal protein S6
30S ribosomal protein S6 alias=gwe1_scaffold_446_76 id=5100386 tax=WS6_GWE1_33_547 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_10
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

11883..12350
DNA (468bp) protein (156aa)
Single-strand binding protein, single-strand DNA-binding protein {ECO:0000313|EMBL:KKP92138.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW20
hypothetical protein
single-strand binding protein; K03111 single-strand DNA-binding protein alias=gwe1_scaffold_446_75 id=5100385 tax=WS6_GWE1_33_547 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_11
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists


12369..12722
DNA (354bp) protein (118aa)
30S ribosomal protein S18, small subunit ribosomal protein S18 {ECO:0000313|EMBL:KKP45976.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 alias=gwe1_scaffold_446_74 id=5100384 tax=WS6_GWE1_33_547 species=Coprothermobacter proteolyticus genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_12
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

12843..14192
DNA (1350bp) protein (450aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ17529.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
seg alias=gwe1_scaffold_446_73 id=5100383 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_13
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

14189..15220
DNA (1032bp) protein (344aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ17530.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
alias=gwe1_scaffold_446_72 id=5100382 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_14

Not on your lists

15271..16503
DNA (1233bp) protein (411aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:KKP55508.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
Carboxyl-terminal protease alias=gwe1_scaffold_446_71 id=5100381 tax=WS6_GWE1_33_547 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_15
GWE1_WS6_34_7, WS6, Bacteria

Not on your lists

16526..17734
DNA (1209bp) protein (403aa)
Trypsin {ECO:0000313|EMBL:KKP63842.1}; TaxID=1619093 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_34_7.;"
Trypsin
Trypsin-like serine protease with C-terminal PDZ domain alias=gwc1_scaffold_103_25 id=5099669 tax=WS6_GWC1_33_22 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
MPJ_scaffold_249_16
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(17731..18534)
DNA (804bp) protein (268aa)
HemK family modification methylase, release factor glutamine methyltransferase {ECO:0000313|EMBL:KKP92131.1}; EC=2.1.1.- {ECO:0000313|EMBL:KKP92131.1};; TaxID=1619090 species="Bacteria; candidate divi
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] alias=gwe1_scaffold_446_69 id=5100379 tax=WS6_GWE1_33_547 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_desc=RuBisCO project-Rubisco Fragmented into 3
protein-(glutamine-N5) methyltransferase
MPJ_scaffold_249_17
GWE1_WS6_34_7, WS6, Bacteria

Not on your lists

comp(18518..19627)
DNA (1110bp) protein (370aa)
Peptide chain release factor 1 {ECO:0000313|EMBL:KKP63840.1}; TaxID=1619093 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_34_7.;"
peptide chain release factor 1
Peptide chain release factor 1 alias=gwe1_scaffold_446_68 id=5100378 tax=WS6_GWE1_33_547 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_18
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists


comp(19683..20021)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45983.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
50S ribosomal protein L31
hypothetical protein; K02909 large subunit ribosomal protein L31 alias=gwe1_scaffold_446_67 id=5100377 tax=WS6_GWE1_33_547 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_19
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

20136..20351
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ12110.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
Protein of unknown function DUF156 alias=gwe1_scaffold_446_65 id=5100375 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_20
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

20452..21096
DNA (645bp) protein (215aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein {ECO:0000313|EMBL:KKP92127.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011
seg alias=gwe1_scaffold_446_64 id=5100374 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_21
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

21121..22431
DNA (1311bp) protein (437aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] alias=gwe1_scaffold_446_63 id=5100373 tax=WS6_GWE1_33_547 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_desc=RuBisCO project-Rubisco Fragmented into 3
Replicative DNA helicase {ECO:0000313|EMBL:KKQ17539.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
replicative DNA helicase
MPJ_scaffold_249_22
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

22634..23416
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ12113.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
hypothetical protein
hypothetical protein alias=gwc1_scaffold_103_17 id=5099661 tax=WS6_GWC1_33_22 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_desc=RuBisCO project
MPJ_scaffold_249_23
RIFOXYB1_FULL_WS6_33_14_curated, Dojkabacteria, Bacteria

Not on your lists

23498..24301
DNA (804bp) protein (268aa)
seg Tax=RIFOXYB1_FULL_WS6_33_14_curated
transmembrane_regions alias=gwe1_scaffold_446_61 id=5100371 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_249_24
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

24304..25296
DNA (993bp) protein (331aa)
pseudouridine synthase (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] alias=gwc1_scaffold_103_14 id=5099658 tax=WS6_GWC1_33_22 species=Clostridium proteoclasticum genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
Pseudouridine synthase {ECO:0000313|EMBL:KKP92695.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
RluA family pseudouridine synthase
MPJ_scaffold_249_25
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

25337..25807
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ16515.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
coiled-coil alias=gwe1_scaffold_446_58 id=5100368 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
Displaying 25 items

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