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MPJ_scaffold_438

Alias: MPJ_UNK_439

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_438_1
GWC2_WS6_36_7, WS6, Bacteria

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1..150
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ11248.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
MPJ_scaffold_438_2
GWC2_WS6_36_7, WS6, Bacteria

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199..819
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ11245.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
MPJ_scaffold_438_3
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

858..2723
DNA (1866bp) protein (622aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP90642.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
MPJ_scaffold_438_4
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

2720..4669
DNA (1950bp) protein (650aa)
Glycosyltransferase {ECO:0000313|EMBL:KKP90643.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
glycosyl transferase
Glycosyl transferase family 2
MPJ_scaffold_438_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4767..7154
DNA (2388bp) protein (796aa)
fnbA; fibronectin-binding protein FnbA
Uncharacterized protein {ECO:0000313|EMBL:CCZ25814.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
Fibronectin-binding protein FnbA
MPJ_scaffold_438_6
unknown

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7182..7592
DNA (411bp) protein (137aa)
MPJ_scaffold_438_7
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(7595..8959)
DNA (1365bp) protein (455aa)
Tyrosine recombinase XerD {ECO:0000313|EMBL:KKQ15526.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
integrase
Tyrosine recombinase XerC alias=gwc1_scaffold_103_4 id=5099648 tax=WS6_GWC1_33_22 species=Glaciecola punicea genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project
MPJ_scaffold_438_8
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(9445..10260)
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ15524.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
transmembrane_regions alias=gwe1_scaffold_446_50 id=5100360 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_438_9
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(10253..11272)
DNA (1020bp) protein (340aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] alias=gwc1_scaffold_103_6 id=5099650 tax=WS6_GWC1_33_22 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000313|EMBL:KKP92687.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;
ruvB; Holliday junction DNA helicase RuvB
MPJ_scaffold_438_10
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(11269..11850)
DNA (582bp) protein (194aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000313|EMBL:KKP92688.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;
Holliday junction DNA helicase RuvA
Holliday junction ATP-dependent DNA helicase RuvA alias=gwe2_scaffold_770_51 id=5085699 tax=GWE2_WS6_33_161 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria organism_desc=RuBisCO project
MPJ_scaffold_438_11
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(11891..12355)
DNA (465bp) protein (155aa)
ruvC; Holliday junction resolvase; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] alias=gwc1_scaffold_103_8 id=5099652 tax=WS6_GWC1_33_22 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_desc=RuBisCO project
Crossover junction endodeoxyribonuclease RuvC {ECO:0000313|EMBL:KKQ16520.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
protein RuvC
MPJ_scaffold_438_12
unknown

Not on your lists

comp(12387..12941)
DNA (555bp) protein (185aa)
MPJ_scaffold_438_13

Not on your lists

comp(12961..13746)
DNA (786bp) protein (262aa)
Transcriptional regulator {ECO:0000313|EMBL:KKP55491.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
Probable transcriptional regulatory protein Calab_2588 alias=gwe1_scaffold_446_54 id=5100364 tax=WS6_GWE1_33_547 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_438_14
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(13779..16256)
DNA (2478bp) protein (826aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP92693.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
hypothetical protein
hypothetical protein cdiviTM7_01505 alias=gwc1_scaffold_103_12 id=5099656 tax=WS6_GWC1_33_22 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project
MPJ_scaffold_438_15
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(16319..17158)
DNA (840bp) protein (280aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ16515.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
coiled-coil alias=gwe1_scaffold_446_58 id=5100368 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
Displaying 15 items

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