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MPJ_scaffold_450

Alias: MPJ_WS6_36_22_5

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_450_1
WS6_GWD2_36_26, WS6, Bacteria

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
serS2; serine--tRNA ligase 2 (EC:6.1.1.11)
Serine-tRNA ligase {ECO:0000313|EMBL:KKQ02681.1}; Flags: Fragment;; TaxID=1619102 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_WS6_36_26.;"
Serine--tRNA ligase alias=gwf1_scaffold_2145_6 id=5101479 tax=WS6_GWF1_33_233 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
MPJ_scaffold_450_2
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

655..1671
DNA (1017bp) protein (339aa)
DHH family protein {ECO:0000313|EMBL:KKQ16066.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
oligoribonuclease/3'-phosphoadenosine 5'-phosphate phosphatase
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein alias=gwe1_scaffold_1618_3 id=5100813 tax=WS6_GWE1_33_547 species=Staphylococcus aureus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_3
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(1652..2077)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP92891.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
hypothetical protein
Putative uncharacterized protein alias=gwe1_scaffold_1618_2 id=5100812 tax=WS6_GWE1_33_547 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_4
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(2103..3572)
DNA (1470bp) protein (490aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=CG_CPR16-01
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase
MPJ_scaffold_450_5
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists


3698..5005
DNA (1308bp) protein (436aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFOXYB1_FULL_WS6_33_15_curated
glycyl-tRNA synthetase
Glycyl-tRNA synthetase alias=ws6_closed_nogaps_final_273 id=5099026 tax=WS6_CLOSED species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi organism_desc=RuBisCO project complete genome
MPJ_scaffold_450_6
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

comp(5002..5466)
DNA (465bp) protein (155aa)
Transcription elongation factor GreA {ECO:0000313|EMBL:KKQ11812.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
transcription elongation factor GreA
Transcription elongation factor GreA alias=gwe1_scaffold_467_49 id=5100451 tax=WS6_GWE1_33_547 species=[Bacteroides] pectinophilus genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_7
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(5553..6200)
DNA (648bp) protein (216aa)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKP92887.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase
tRNA (guanine-N(1)-)-methyltransferase alias=gwe2_scaffold_998_46 id=5085911 tax=GWE2_WS6_33_161 species=Staphylococcus warneri genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_desc=RuBisCO project
MPJ_scaffold_450_8
RIFOXYB1_FULL_WS6_33_14_curated, Dojkabacteria, Bacteria

Not on your lists

comp(6203..6952)
DNA (750bp) protein (250aa)
id=5803418 Tax=RIFOXYB1_FULL_WS6_33_14_curated
hypothetical protein alias=ACD22_13902.18214.18G0006,ACD22_13902.18214.18_6,ACD22_C00058G00006 id=23114 tax=ACD22 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
MPJ_scaffold_450_9
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

7057..7518
DNA (462bp) protein (154aa)
Transcription elongation factor GreA {ECO:0000313|EMBL:KKP92886.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
hypothetical protein
Transcription elongation factor GreA alias=ws6_closed_nogaps_final_267 id=5099020 tax=WS6_CLOSED species=Anaerococcus lactolyticus genus=Anaerococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project complete genome
MPJ_scaffold_450_10
GWE1_WS6_34_7, WS6, Bacteria

Not on your lists

comp(7515..8219)
DNA (705bp) protein (235aa)
pyrH; Uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] alias=gwe1_scaffold_467_46 id=5100448 tax=WS6_GWE1_33_547 species=unknown genus=Borrelia taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_desc=RuBisCO project-Rubisco Fragmented into 3
Uridylate kinase {ECO:0000313|EMBL:KKP64963.1}; TaxID=1619093 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_34_7.;"
uridylate kinase
MPJ_scaffold_450_11
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(8224..9018)
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP92884.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
transmembrane_regions alias=gwe1_scaffold_467_45 id=5100447 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_12
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(9040..10449)
DNA (1410bp) protein (470aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP92883.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
hypothetical protein
Uncharacterized protein alias=gwe1_scaffold_467_44 id=5100446 tax=WS6_GWE1_33_547 species=Rhodococcus erythropolis genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_13
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(10562..10831)
DNA (270bp) protein (90aa)
DNA-binding protein {ECO:0000313|EMBL:KKP92882.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
histone family protein DNA-binding protein
DNA-binding protein HU alias=gwc1_scaffold_211_34 id=5099779 tax=WS6_GWC1_33_22 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_desc=RuBisCO project
MPJ_scaffold_450_14
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(11222..12745)
DNA (1524bp) protein (508aa)
Ribonuclease Y {ECO:0000313|EMBL:KKP92881.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
RNA binding metal dependent phosphohydrolase
metal dependent phosphohydrolase; K06950 uncharacterized protein alias=gwe1_scaffold_467_42 id=5100444 tax=WS6_GWE1_33_547 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_15
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(12927..13967)
DNA (1041bp) protein (347aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFOXYB1_FULL_WS6_33_15_curated
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase alias=gwe1_scaffold_467_41 id=5100443 tax=WS6_GWE1_33_547 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPJ_scaffold_450_16
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(13971..15053)
DNA (1083bp) protein (361aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000313|EMBL:KKP82550.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35
S-adenosylmethionine:tRNA ribosyltransferase-isomerase alias=gwe2_scaffold_998_38 id=5085903 tax=GWE2_WS6_33_161 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_desc=RuBisCO project
MPJ_scaffold_450_17
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

15083..16033
DNA (951bp) protein (317aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] alias=gwf1_scaffold_290_47 id=5101011 tax=WS6_GWF1_33_233 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_desc=RuBisCO project
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:KKP92877.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
MPJ_scaffold_450_18
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

comp(16076..16408)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ11723.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
transposase
Transposase
Displaying 18 items

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