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MPJ_scaffold_620

Alias: MPJ_Archaeon_partial_49_7_1

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_620_1
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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1..294
DNA (294bp) protein (98aa)
putative nicotinate phosphoribosyltransferase (EC:6.3.4.21)
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56289.1}; EC=6.3.4.21 {ECO:0000313|EMBL:AIZ56289.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata;
Nicotinic acid phosphoribosyltransferase
MPJ_scaffold_620_2
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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632..850
DNA (219bp) protein (73aa)
hypothetical protein
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56290.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoc
MPJ_scaffold_620_3
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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923..1516
DNA (594bp) protein (198aa)
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:AGN26177.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.
Conserved protein
MPJ_scaffold_620_4
unknown

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1513..1962
DNA (450bp) protein (150aa)
MPJ_scaffold_620_5
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1983..4307)
DNA (2325bp) protein (775aa)
Topoisomerase IA (EC:5.99.1.2) rbh
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1054217 species="Archaea; Euryarchae
Topoisomerase IA
MPJ_scaffold_620_6
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4359..4814)
DNA (456bp) protein (152aa)
Nickel responsive regulator NikR
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environ
Nickel responsive regulator NikR
MPJ_scaffold_620_7
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4993..5730
DNA (738bp) protein (246aa)
asparagine synthetase B
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56293.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoc
Asparagine synthetase related protein
MPJ_scaffold_620_8
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

5727..6992
DNA (1266bp) protein (422aa)
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13 6.3.2.7) rbh
MurE protein {ECO:0000313|EMBL:AIZ56294.1}; EC=6.3.2.13 {ECO:0000313|EMBL:AIZ56294.1};; EC=6.3.2.7 {ECO:0000313|EMBL:AIZ56294.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methan
Dihydrofolate synthase / Folylpolyglutamate synthase
MPJ_scaffold_620_9
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6965..7216
DNA (252bp) protein (84aa)
Endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000313|EMBL:CDF30926.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;" source
Endonuclease III
MPJ_scaffold_620_10
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7467..7838
DNA (372bp) protein (124aa)
hypA; hydrogenase nickel incorporation protein
Hydrogenase nickel incorporation protein {ECO:0000313|EMBL:AGN26199.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassili
Zn finger protein HypA/HybF (Possibly regulating hydrogenase expression)
MPJ_scaffold_620_11
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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7835..8920
DNA (1086bp) protein (362aa)
hydrogenase isoenzymes formation protein HypD
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:AGN26198.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanoma
[NiFe] hydrogenase metallocenter assembly protein HypD
MPJ_scaffold_620_12
unknown

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comp(8950..9498)
DNA (549bp) protein (183aa)
MPJ_scaffold_620_13
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9972..11429
DNA (1458bp) protein (486aa)
putative ATP-dependent RNA helicase (EC:3.6.4.13)
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56503.1}; EC=3.6.4.13 {ECO:0000313|EMBL:AIZ56503.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata;
Cold-shock DEAD-box protein A
MPJ_scaffold_620_14
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(11430..14030)
DNA (2601bp) protein (867aa)
IleS2 protein {ECO:0000313|EMBL:AIZ56504.1}; EC=6.1.1.5 {ECO:0000313|EMBL:AIZ56504.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae
ileS2; isoleucine--tRNA ligase (EC:6.1.1.5) rbh
Valyl-tRNA synthetase
MPJ_scaffold_620_15
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14075..15250)
DNA (1176bp) protein (392aa)
hypothetical protein rbh
CBS domain containing membrane protein {ECO:0000313|EMBL:CDF30972.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environme
Uncharacterized protein
MPJ_scaffold_620_16
unknown

Not on your lists

comp(15231..15341)
DNA (111bp) protein (37aa)
MPJ_scaffold_620_17
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(15469..17169)
DNA (1701bp) protein (567aa)
glyQS; glycine--tRNA ligase rbh
GlyQS protein {ECO:0000313|EMBL:AIZ56506.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candi
Glycyl-tRNA synthetase
MPJ_scaffold_620_18
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(17179..18027)
DNA (849bp) protein (283aa)
putative transcriptional regulator, contains C-terminal CBS domains Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
putative transcriptional regulator, contains C-terminal CBS domains
Putative transcriptional regulator, contains C-terminal CBS domains
MPJ_scaffold_620_19
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

comp(18027..18467)
DNA (441bp) protein (147aa)
universal stress protein Tax=RBG_13_Euryarchaeota_61_15_curated
universal stress protein
Universal stress protein
MPJ_scaffold_620_20
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(18481..19521)
DNA (1041bp) protein (347aa)
Cytosine deaminase-related metal-dependent hydrolase
Cytosine deaminase-related metal-dependent hydrolase {ECO:0000313|EMBL:AGN26394.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Me
Pyrimidine deaminase archaeal predicted
MPJ_scaffold_620_21
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

19860..20027
DNA (168bp) protein (56aa)
ferredoxin Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
ferredoxin
Dissimilatory sulfite reductase (Desulfoviridin), alpha and beta subunits
Displaying 21 items

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