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MPJ_scaffold_1708

Alias: MPJ_Archaeon_partial_49_7_20

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPJ_scaffold_1708_1
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3..230)
DNA (228bp) protein (76aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1295009 species="Archaea
Tryptophanyl-tRNA synthetase
Tryptophanyl-tRNA synthetase
MPJ_scaffold_1708_2
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

465..1220
DNA (756bp) protein (252aa)
ubaA; SAMP-activating enzyme E1 (EC:2.7.7.-)
UbaA protein {ECO:0000313|EMBL:AIZ55942.1}; EC=2.7.7.- {ECO:0000313|EMBL:AIZ55942.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae;
UBA/THIF-type NAD/FAD binding protein
MPJ_scaffold_1708_3
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

1290..1526
DNA (237bp) protein (79aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_62_10_curated
hypothetical protein
MPJ_scaffold_1708_4
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

1527..2042
DNA (516bp) protein (172aa)
hypothetical protein Tax=RBG_13_Euryarchaeota_57_23_curated
ubiquitin-conjugating enzyme
NEDD8-conjugating enzyme UBC12
MPJ_scaffold_1708_5
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

2027..2626
DNA (600bp) protein (200aa)
psmD14; 26S proteasome non-ATPase regulatory subunit 14; K03030 26S proteasome regulatory subunit N11 Tax=RBG_13_Euryarchaeota_61_15_curated
Mov34/MPN/PAD-1 family protein
26S proteasome regulatory subunit
MPJ_scaffold_1708_6
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2623..3162)
DNA (540bp) protein (180aa)
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI)
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI) {ECO:0000313|EMBL:AGN26955.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassi
Putative sugar phosphate isomerase involved in capsule formation
MPJ_scaffold_1708_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3159..4226)
DNA (1068bp) protein (356aa)
Xylose isomerase domain protein TIM barrel
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:AGN26956.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassi
Endonuclease IV
MPJ_scaffold_1708_8
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


4442..4804
DNA (363bp) protein (121aa)
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;"
50S ribosomal protein L18e
MPJ_scaffold_1708_9
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


4810..5229
DNA (420bp) protein (140aa)
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;"
LSU ribosomal protein L13Ae (L13p)
MPJ_scaffold_1708_10
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


5234..5635
DNA (402bp) protein (134aa)
SSU ribosomal protein S16e (S9p)
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccac
SSU ribosomal protein S16e (S9p)
MPJ_scaffold_1708_11
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


5641..5832
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobial
DNA-directed RNA polymerase subunit N
MPJ_scaffold_1708_12
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6059..6640
DNA (582bp) protein (194aa)
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACL70932.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source
4Fe-4S ferredoxin iron-sulfur binding domain protein
Displaying 12 items

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