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RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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553..795
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEA5_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(971..1768)
DNA (798bp) protein (266aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Inositol monophosphatase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWC8_NITHN
inositol monophosphatase
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1890..2621
DNA (732bp) protein (244aa)
TrmH family RNA methyltransferase; K15396 tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
tRNA/rTrmH family RNA methyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6V3_9GAMM
TrmH family RNA methyltransferase
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2674..3468
DNA (795bp) protein (265aa)
Serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Serine O-acetyltransferase (EC:2.3.1.30)
serine O-acetyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036713B8
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3528..3983
DNA (456bp) protein (152aa)
Iron-sulfur cluster assembly transcription factor IscR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3R5_NITHN
iron-sulfur cluster assembly transcription factor IscR; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
iron-sulfur cluster assembly transcription factor IscR
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4007..5155
DNA (1149bp) protein (383aa)
Cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3R6_NITHN
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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5294..6508
DNA (1215bp) protein (405aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
iscS; cysteine desulfurase IscS (EC:2.8.1.7)
cysteine desulfurase n=1 Tax=Burkholderia kururiensis RepID=UPI000345253B
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..7012
DNA (408bp) protein (136aa)
FeS cluster assembly scaffold IscU n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000371F163
FeS cluster assembly scaffold IscU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
FeS cluster assembly scaffold IscU
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7046..7369
DNA (324bp) protein (108aa)
Iron-binding protein IscA n=13 Tax=Actinobacillus pleuropneumoniae RepID=A3N0T9_ACTP2
iscA; iron-binding protein; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
iron-binding protein IscA
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7389..7967
DNA (579bp) protein (193aa)
Co-chaperone protein HscB homolog n=2 Tax=sulfur-oxidizing symbionts RepID=G2DEA6_9GAMM
hscB; co-chaperone HscB; K04082 molecular chaperone HscB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
molecular chaperone HscB
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8132..10171
DNA (2040bp) protein (680aa)
Chaperone protein HscA homolog n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHA9_9GAMM
2-alkenal reductase; K04044 molecular chaperone HscA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
chaperone protein HscA
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10168..10506
DNA (339bp) protein (113aa)
2Fe-2S ferredoxin n=1 Tax=Endozoicomonas elysicola RepID=UPI00036487C6
ferredoxin 2Fe-2S type, ISC system; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ferredoxin 2Fe-2S
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10639..10842
DNA (204bp) protein (68aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=1326612 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11099..12151
DNA (1053bp) protein (351aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ51_NITHN
radical SAM protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12148..12912
DNA (765bp) protein (255aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B4X4_9PROT
type IV pilus biogenesis/stability protein PilW Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
type IV pilus biogenesis/stability protein PilW
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12916..13929
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003740515
transcriptional regulator; K15539 cytoskeleton protein RodZ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
transcriptional regulator
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13929..15062
DNA (1134bp) protein (378aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N2P1_9GAMM
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15073..16377
DNA (1305bp) protein (435aa)
Histidine--tRNA ligase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
histidine--tRNA ligase (EC:6.1.1.21)
histidyl-tRNA synthetase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000372CFDD
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16509..17147
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=12493868 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17144..18286
DNA (1143bp) protein (381aa)
Outer membrane protein assembly factor BamB n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XHW2_METNJ
Outer membrane YfgL-like protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
outer membrane YfgL-like protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18477..19862
DNA (1386bp) protein (462aa)
GTPase Der n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BXK7_9GAMM
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
engA; GTP-binding protein EngA
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20126..22285
DNA (2160bp) protein (720aa)
Serine/threonine-protein kinase-like domain protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JB70_HYPSM
serine/threonine protein kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
serine/threonine-protein kinase-like domain-containing protein
RIFCSPHIGHO2_01_Gammaproteobacteria_60_12_rifcsphigho2_01_sub10_scaffold_385_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22373..23176)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000380F892
Membrane protein/metalloendopeptidase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Membrane protein/metalloendopeptidase
Displaying 23 items

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