ggKbase home page

RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019

Search features with annotation key words

Displaying 9 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_1
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

16..1218
DNA (1203bp) protein (401aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu id=2173690 bin=GWB2_CP_45_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_2
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


1223..1372
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL33_SOLUE
50S ribosomal protein L33
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_trna_1
unknown

Not on your lists

1377..1450
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_3
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

1673..2203
DNA (531bp) protein (177aa)
Transcription antitermination protein nusG id=4769381 bin=GWA2_OP3_52_12 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
NusG antitermination factor
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_4
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


2205..2630
DNA (426bp) protein (142aa)
50S ribosomal protein L11 id=4218945 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplK; 50S ribosomal protein L11
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_5
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


2636..3328
DNA (693bp) protein (231aa)
50S ribosomal protein L1 id=4542382 bin=GWC2_Nitrospirae_57_13 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rplA; 50S ribosomal protein L1
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_6
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


3336..3866
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZMG8_9FIRM
ribosomal protein L10
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_7
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


3890..4303
DNA (414bp) protein (138aa)
50S ribosomal protein L7/L12 id=3686053 bin=GWF2_OP3_38_59 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_31019_8
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

4313..6418
DNA (2106bp) protein (702aa)
DNA-directed RNA polymerase subunit beta id=4769376 bin=GWA2_OP3_52_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rpoB; DNA-directed RNA polymerase subunit beta
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Displaying 9 items

View Taxonomy