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RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_1
RLO_WOR_2_51_24, WOR-2, Bacteria

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12..278
DNA (267bp) protein (89aa)
Antibiotic resistance transcriptional regulator, MerR family id=4237417 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_2
RLO_WOR_2_51_24, WOR-2, Bacteria

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611..811
DNA (201bp) protein (67aa)
Cold shock protein id=3623475 bin=GWF2_OP3_38_59 species=unknown genus=Leuconostoc taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Cold shock protein CspA
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_3
RLO_WOR_2_51_24, WOR-2, Bacteria

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874..2166
DNA (1293bp) protein (431aa)
Putative cobalamin B12-binding/Radical SAM family protein id=4075963 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_4
RLO_WOR_2_51_24, WOR-2, Bacteria

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2183..3256
DNA (1074bp) protein (358aa)
EngD id=1726884 bin=GWB2_Desulfobacterales_56_26 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
engD; GTP-dependent nucleic acid-binding protein EngD
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_5
RLO_WOR_2_51_24, WOR-2, Bacteria

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3338..4372
DNA (1035bp) protein (345aa)
Ni/Fe hydrogenase beta subunit id=2096911 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Ni/Fe hydrogenase subunit beta
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_6
RLO_WOR_2_51_24, WOR-2, Bacteria

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4369..5205
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037BEC6C
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_7
RLO_WOR_2_51_24, WOR-2, Bacteria

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5208..5960
DNA (753bp) protein (251aa)
F420-non-reducing hydrogenase vhu subunit G (EC:1.12.99.-)
cytochrome B n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003786DEF
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_8
RLO_WOR_2_51_24, WOR-2, Bacteria

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5957..7282
DNA (1326bp) protein (442aa)
nickel-dependent hydrogenase large subunit n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4F5D5
nickel-dependent hydrogenase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_9
RLO_WOR_2_51_24, WOR-2, Bacteria

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7260..7745
DNA (486bp) protein (162aa)
Ni,Fe-hydrogenase maturation factor id=2433057 bin=GWF1_Spirochaetes_51_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Ni,Fe-hydrogenase maturation factor
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_10
RLO_WOR_2_51_24, WOR-2, Bacteria

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7738..7980
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4036D
hydrogenase-3 nickel incorporation protein HypA
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13026_11
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

7985..8962
DNA (978bp) protein (326aa)
biotin synthase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B43E8D
BioB; biotin synthase and related enzymes
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Displaying 11 items

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