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RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_1
CG_Omnitr_03, Omnitrophica, Bacteria

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1..879
DNA (879bp) protein (293aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=CG_Omnitr_03
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Protein containing Cell wall hydrolase/autolysin, catalytic domain (Fragment) id=3572149 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_2
R_OP3X_45_10, OP3X, Bacteria

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876..1679
DNA (804bp) protein (268aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Glutamate racemase id=2886467 bin=GWC2_OP3_44_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Glutamate racemase
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_3
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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1672..2040
DNA (369bp) protein (123aa)
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RBG_13_WOR_2_41_10_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMZ3_GEOS8
6-pyruvoyl-tetrahydropterin synthase
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_4
CG_Omnitr_07, Omnitrophica, Bacteria

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2037..2738
DNA (702bp) protein (234aa)
queuosine biosynthesis protein QueC Tax=CG_Omnitr_07
7-cyano-7-deazaguanine synthase id=2050200 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
exsB protein
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_5
CG_Omnitr_07, Omnitrophica, Bacteria

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2735..3445
DNA (711bp) protein (237aa)
Organic radical activating enzyme n=1 Tax=sediment metagenome RepID=D9PIC0_9ZZZZ
queuosine biosynthesis protein QueC Tax=CG_Omnitr_07
radical SAM protein
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_6
R_WOR_2_45_21, WOR-2, Bacteria

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3442..4284
DNA (843bp) protein (281aa)
putative fumarate hydratase subunit alpha (EC:4.2.1.2) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
fumarate hydratase (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Clostridium thermocellum JW20 RepID=D1NI03_CLOTM
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_7
CG_Elusi_02, Elusimicrobia, Bacteria

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4286..4801
DNA (516bp) protein (172aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha; K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=CG_Elusi_02
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJ87_THEYD
Fe-S type tartrate/fumarate subfamily hydro-lyase
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_8
R_WOR_2_41_12, WOR-2, Bacteria

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4803..5525
DNA (723bp) protein (241aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH id=4701990 bin=GWC2_Nitrospirae-rel_56_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_9
R_OP3X_51_18, OP3X, Bacteria

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5526..6134
DNA (609bp) protein (203aa)
Non-canonical purine NTP pyrophosphatase id=1710225 bin=GWA2_OP3_53_43 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_88601_10
unknown

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comp(6100..6375)
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying 10 items

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