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RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_1

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comp(1..222)
DNA (222bp) protein (74aa)
SerS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CEB1_THEYO
Marine sediment metagenome DNA, contig: S01H4_S13052 {ECO:0000313|EMBL:GAH02085.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_2

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comp(210..872)
DNA (663bp) protein (221aa)
Marine sediment metagenome DNA, contig: S01H1_L00856 {ECO:0000313|EMBL:GAF71162.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_3
R_OP3X_45_10, OP3X, Bacteria

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comp(1490..2065)
DNA (576bp) protein (192aa)
Ribosome-recycling factor n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q4K6_9DELT
ribosome-recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
ribosome recycling factor
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_4
R_WOR_2_41_12, WOR-2, Bacteria

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comp(2086..2331)
DNA (246bp) protein (82aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] id=24471607 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
pyrH; uridylate kinase
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_5
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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comp(2321..2848)
DNA (528bp) protein (176aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_13_OP3X_46_9_curated
uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=PYRH_MOOTA
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_6
R_WOR_2_45_21, WOR-2, Bacteria

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comp(2853..3374)
DNA (522bp) protein (174aa)
translation elongation factor ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Elongation factor Ts id=4123598 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
translation elongation factor Ts
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_7
R_OP3X_45_16, OP3X, Bacteria

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comp(3378..4238)
DNA (861bp) protein (287aa)
SSU ribosomal protein S2P Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
30S ribosomal protein S2 id=4303020 bin=GWC2_OP3_44_8 species=Dialister succinatiphilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rpsB; 30S ribosomal protein S2
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_8
R_OP3X_45_10, OP3X, Bacteria

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comp(4332..6173)
DNA (1842bp) protein (614aa)
ABC-type multidrug transport system protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
ABC transporter id=4303019 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
phospholipid-lipopolysaccharide ABC transporter
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_9
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

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comp(6207..8303)
DNA (2097bp) protein (699aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Cell wall/surface repeat protein id=2032740 bin=GWD2_RBX1-related_39_127 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_10
R_OP3X_45_10, OP3X, Bacteria

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8461..9390
DNA (930bp) protein (310aa)
dehydrogenase Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
dehydrogenase
Putative oxidoreductase id=1965238 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_29802_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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9375..9920
DNA (546bp) protein (182aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase id=2910919 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Displaying 11 items

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