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cg_0.2_sub10_scaffold_254_c

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_254_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

491..1066
DNA (576bp) protein (192aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Omnitr_03
ECF subfamily RNA polymerase sigma-24 subunit
cg_0.2_sub10_scaffold_254_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1095..1571
DNA (477bp) protein (159aa)
Tax=CG_Omnitr_03
cg_0.2_sub10_scaffold_254_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1568..2239
DNA (672bp) protein (224aa)
Putative amidophosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:452 RepID=R6YHF9_9CLOT rbh
phosphoribosyltransferase Tax=CG_Omnitr_03
phosphoribosyltransferase
cg_0.2_sub10_scaffold_254_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

2239..3330
DNA (1092bp) protein (364aa)
YjgP/YjgQ family permease Tax=CG_Omnitr_03
YjgP/YjgQ family permease
cg_0.2_sub10_scaffold_254_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3337..4431
DNA (1095bp) protein (365aa)
permease Tax=CG_Omnitr_03
permease
cg_0.2_sub10_scaffold_254_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(4550..5365)
DNA (816bp) protein (272aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=CG_Omnitr_03
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3709C rbh
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase
cg_0.2_sub10_scaffold_254_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5362..6108)
DNA (747bp) protein (249aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=CG_Omnitr_03
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
cg_0.2_sub10_scaffold_254_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(6112..7080)
DNA (969bp) protein (323aa)
ADP-heptose synthase Tax=CG_Omnitr_03
ADP-heptose synthase
cg_0.2_sub10_scaffold_254_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7077..8012)
DNA (936bp) protein (312aa)
hypothetical protein Tax=CG_Omnitr_03
hypothetical protein
cg_0.2_sub10_scaffold_254_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(8032..8868)
DNA (837bp) protein (279aa)
hypothetical protein Tax=CG_Omnitr_03
hypothetical protein
cg_0.2_sub10_scaffold_254_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(8846..9874)
DNA (1029bp) protein (343aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=CG_Omnitr_03
lipopolysaccharide heptosyltransferase II
cg_0.2_sub10_scaffold_254_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(9871..10830)
DNA (960bp) protein (320aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=CG_Omnitr_03
lipopolysaccharide heptosyltransferase II
cg_0.2_sub10_scaffold_254_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10830..11801)
DNA (972bp) protein (324aa)
lipopolysaccharide heptosyltransferase III; K02849 heptosyltransferase III [EC:2.4.-.-] Tax=CG_Omnitr_03
lipopolysaccharide heptosyltransferase III
cg_0.2_sub10_scaffold_254_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(11773..12588)
DNA (816bp) protein (272aa)
polysaccharide deacetylase Tax=CG_Omnitr_03
polysaccharide deacetylase
cg_0.2_sub10_scaffold_254_c_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(12566..13681)
DNA (1116bp) protein (372aa)
group 1 glycosyl transferase Tax=CG_Omnitr_03
group 1 glycosyl transferase
cg_0.2_sub10_scaffold_254_c_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(13678..15783)
DNA (2106bp) protein (702aa)
glycosyltransferase (EC:2.4.1.-); K00754 [EC:2.4.1.-] Tax=CG_Omnitr_03
glycosyltransferase (EC:2.4.1.-)
cg_0.2_sub10_scaffold_254_c_17
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(15780..17735)
DNA (1956bp) protein (652aa)
Lauroyl/myristoyl acyltransferase Tax=CG_Omnitr_03
Lauroyl/myristoyl acyltransferase
cg_0.2_sub10_scaffold_254_c_18
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(17732..18856)
DNA (1125bp) protein (375aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=CG_Omnitr_03
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTV1_ACEAZ rbh
cg_0.2_sub10_scaffold_254_c_19
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(18853..20079)
DNA (1227bp) protein (409aa)
3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=CG_Omnitr_03
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B693BE rbh
3-deoxy-D-manno-octulosonic-acid transferase
cg_0.2_sub10_scaffold_254_c_20
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(20219..21097)
DNA (879bp) protein (293aa)
tyrosine recombinase xerC; K03733 integrase/recombinase XerC Tax=CG_Omnitr_03
tyrosine recombinase xerC
cg_0.2_sub10_scaffold_254_c_21
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(21097..23073)
DNA (1977bp) protein (659aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=CG_Omnitr_03
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B424C3 rbh
cg_0.2_sub10_scaffold_254_c_22
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(23058..24146)
DNA (1089bp) protein (363aa)
DNA protecting protein DprA; K04096 DNA processing protein Tax=CG_Omnitr_03
DNA protecting protein DprA
cg_0.2_sub10_scaffold_254_c_23
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(24176..24676)
DNA (501bp) protein (167aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=CG_Omnitr_03
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=AROK_THEYD rbh
cg_0.2_sub10_scaffold_254_c_24
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(24676..25722)
DNA (1047bp) protein (349aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=CG_Omnitr_03
chorismate synthase (EC:4.2.3.5)
cg_0.2_sub10_scaffold_254_c_25
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(25707..26480)
DNA (774bp) protein (258aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Omnitr_03
peptidase A24A domain-containing protein
cg_0.2_sub10_scaffold_254_c_26
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(26480..27358)
DNA (879bp) protein (293aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=CG_Omnitr_03
shikimate dehydrogenase
cg_0.2_sub10_scaffold_254_c_27
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(27363..28859)
DNA (1497bp) protein (499aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Omnitr_03
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
cg_0.2_sub10_scaffold_254_c_28
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(28869..29489)
DNA (621bp) protein (207aa)
ilvC; ketol-acid reductoisomerase IlvC (EC:1.1.1.86)
ilvC; putative ketol-acid reductoisomerase Tax=RBG_13_WOR_2_41_10_curated
Displaying 28 items

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