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cg1_0.2_scaffold_4339_c

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4339_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(315..962)
DNA (648bp) protein (216aa)
hypothetical protein Tax=CG_Omnitr_03
PHP domain protein id=3369484 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
cg1_0.2_scaffold_4339_c_trna_1
unknown

Not on your lists

comp(1101..1174)
DNA (74bp)
transferRNA
cg1_0.2_scaffold_4339_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1291..1821)
DNA (531bp) protein (177aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=CG_Omnitr_03
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase id=3858435 bin=GWF2_OP3_38_59 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
cg1_0.2_scaffold_4339_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1818..2639)
DNA (822bp) protein (274aa)
rpoD1; RNA polymerase sigma factor RpoD Tax=CG_Omnitr_03
RNA polymerase sigma factor id=3858436 bin=GWF2_OP3_38_59 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rpoD1; RNA polymerase sigma factor RpoD
cg1_0.2_scaffold_4339_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(2636..5368)
DNA (2733bp) protein (911aa)
pyruvate phosphate dikinase Tax=CG_Omnitr_03
Pyruvate phosphate dikinase id=2882174 bin=GWF2_OP3_43_52 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
pyruvate phosphate dikinase
cg1_0.2_scaffold_4339_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(5374..6699)
DNA (1326bp) protein (442aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=CG_Omnitr_03
Glycyl-tRNA synthetase n=1 Tax=sediment metagenome RepID=D9PK28_9ZZZZ
glycyl-tRNA synthetase
cg1_0.2_scaffold_4339_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(6692..7258)
DNA (567bp) protein (189aa)
recO; DNA repair protein RecO Tax=CG_Omnitr_03
DNA repair protein RecO id=2881998 bin=GWF2_OP3_43_52 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
recO; DNA repair protein RecO
cg1_0.2_scaffold_4339_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7275..7973)
DNA (699bp) protein (233aa)
Diacylglycerol kinase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VX04_THESW
diacylglycerol kinase Tax=CG_Omnitr_03
diacylglycerol kinase
cg1_0.2_scaffold_4339_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7970..8413)
DNA (444bp) protein (148aa)
Endoribonuclease YbeY n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=YBEY_PELTS rbh
putative metalloprotease; K07042 probable rRNA maturation factor Tax=CG_Omnitr_03
putative metalloprotease
cg1_0.2_scaffold_4339_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(8394..10529)
DNA (2136bp) protein (712aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E90C6
metal dependent phosphohydrolase Tax=CG_Omnitr_03
metal dependent phosphohydrolase
cg1_0.2_scaffold_4339_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10532..10891)
DNA (360bp) protein (120aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_4339_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(10958..12745)
DNA (1788bp) protein (596aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Omnitr_03
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=SYD_GEOUR rbh
cg1_0.2_scaffold_4339_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(12771..14015)
DNA (1245bp) protein (415aa)
Histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Omnitr_03
Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase id=2881983 bin=GWF2_OP3_43_52 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_4339_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(14015..14293)
DNA (279bp) protein (93aa)
histone family protein DNA-binding protein Tax=CG_Omnitr_03
Histone family protein DNA-binding protein id=3685715 bin=GWF2_OP3_38_59 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
histone family protein DNA-binding protein
cg1_0.2_scaffold_4339_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(14563..18069)
DNA (3507bp) protein (1169aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_4339_c_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(18066..18242)
DNA (177bp) protein (59aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_4339_c_16
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(18435..18638)
DNA (204bp) protein (68aa)
Putative transposase Tax=CG_Elusi_05
Displaying 17 items

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