ggKbase home page

cg1_0.2_scaffold_1531_c

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1531_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=CG_Omnitr_03
cg1_0.2_scaffold_1531_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(159..1829)
DNA (1671bp) protein (557aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_Omnitr_03
Arginine--tRNA ligase id=2740037 bin=GWF2_OP3_38_59 species=Halobacillus halophilus genus=Halobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
arginyl-tRNA synthetase
cg1_0.2_scaffold_1531_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1911..2240)
DNA (330bp) protein (110aa)
Ribosomal silencing factor RsfS n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2SRF3_9FIRM
hypothetical protein; K09710 ribosome-associated protein Tax=CG_Omnitr_03
hypothetical protein
cg1_0.2_scaffold_1531_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(2280..2426)
DNA (147bp) protein (49aa)
hypothetical protein Tax=CG_Omnitr_03
Putative uncharacterized protein id=4192610 bin=GWC2_OP3_44_8 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
cg1_0.2_scaffold_1531_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(2580..3551)
DNA (972bp) protein (324aa)
hypothetical protein; K03699 putative hemolysin Tax=CG_Omnitr_03
hypothetical protein id=14428947 bin=bin3_NC10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
cg1_0.2_scaffold_1531_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3555..4787)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVA3_ACEAZ
hypothetical protein Tax=CG_Omnitr_03
hypothetical protein
cg1_0.2_scaffold_1531_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(4789..5361)
DNA (573bp) protein (191aa)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1Z506_9CLOT
nicotinate/nicotinamide nucleotide adenylyltransferase Tax=CG_Omnitr_03
nicotinate/nicotinamide nucleotide adenylyltransferase
cg1_0.2_scaffold_1531_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5363..6583)
DNA (1221bp) protein (407aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=CG_Omnitr_03
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase id=5029016 bin=GWA2_OP3_53_43 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
cg1_0.2_scaffold_1531_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(6580..7359)
DNA (780bp) protein (260aa)
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=CG_Omnitr_03
Glutamate 5-kinase n=1 Tax=Thermincola potens (strain JR) RepID=D5XBC6_THEPJ
glutamate 5-kinase
cg1_0.2_scaffold_1531_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7356..8324)
DNA (969bp) protein (323aa)
GTP-binding protein Obg/CgtA; K03979 GTP-binding protein Tax=CG_Omnitr_03
GTPase CgtA id=4039629 bin=GWF2_OP3_43_52 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GTP-binding protein Obg/CgtA
cg1_0.2_scaffold_1531_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(8431..8679)
DNA (249bp) protein (83aa)
50S ribosomal protein L27 n=1 Tax=Alistipes sp. CAG:157 RepID=R5WGN1_9BACT
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 Tax=CG_Omnitr_03
50S ribosomal protein L25
cg1_0.2_scaffold_1531_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(8703..9023)
DNA (321bp) protein (107aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=CG_Omnitr_03
50S ribosomal protein L21 id=3098448 bin=GWB1_CP_36_13 species=Bacillus thuringiensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
LSU ribosomal protein L21p
cg1_0.2_scaffold_1531_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(9034..10536)
DNA (1503bp) protein (501aa)
cafA; RNase EG; K08301 ribonuclease G [EC:3.1.26.-] Tax=CG_Omnitr_03
ribonuclease E n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6C83A
cafA; ribonuclease G
cg1_0.2_scaffold_1531_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10536..10841)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9P6_HALP7
radical SAM-linked protein/radical SAM family protein Tax=CG_Omnitr_03
hypothetical protein
cg1_0.2_scaffold_1531_c_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10841..11125)
DNA (285bp) protein (95aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_1531_c_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(11122..12675)
DNA (1554bp) protein (518aa)
type IV pilus assembly protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=CG_Omnitr_03
Type IV pilus biogenesis protein PilQ id=4039617 bin=GWF2_OP3_43_52 species=unknown genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
type IV pilus assembly protein PilQ
cg1_0.2_scaffold_1531_c_17
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(12735..14432)
DNA (1698bp) protein (566aa)
radical SAM family protein Tax=CG_Omnitr_03
Radical SAM domain protein id=1916911 bin=GWB2_CP_45_9 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
radical SAM family protein
cg1_0.2_scaffold_1531_c_18
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(14495..15187)
DNA (693bp) protein (231aa)
id=3003719 Tax=CG_Omnitr_03
id=3003719 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
cg1_0.2_scaffold_1531_c_19
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(15184..15567)
DNA (384bp) protein (128aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_1531_c_20
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(15545..17122)
DNA (1578bp) protein (526aa)
shikimate/quinate 5-dehydrogenase Tax=CG_Omnitr_03
Shikimate/quinate 5-dehydrogenase id=4808454 bin=GWC2_OP3-like_45_7 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
shikimate/quinate 5-dehydrogenase
cg1_0.2_scaffold_1531_c_21
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(17088..17630)
DNA (543bp) protein (181aa)
NlpD fragment Tax=CG_Omnitr_03
Peptidase M23 id=2284912 bin=GWB2_CP_45_9 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
NlpD fragment
cg1_0.2_scaffold_1531_c_22
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(17746..24537)
DNA (6792bp) protein (2264aa)
Peptidase S8/S53 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV76_9BACT
RHS Repeat family Tax=CG_Omnitr_03
Subtilisin-like serine proteases (peptidase S8 family)
Displaying 22 items

View Taxonomy