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cg1_0.2_scaffold_3805_c

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3805_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(2..100)
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XLG9_HIRBI
translation elongation factor Tu; K02358 elongation factor Tu Tax=CG_Omnitr_03
translation elongation factor Tu
cg1_0.2_scaffold_3805_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(102..2234)
DNA (2133bp) protein (711aa)
Elongation factor G n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=EFG_MOOTA rbh
fusA; elongation factor G; K02355 elongation factor G Tax=CG_Omnitr_03
fusA; elongation factor G
cg1_0.2_scaffold_3805_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(2215..2685)
DNA (471bp) protein (157aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=CG_Omnitr_03
30S ribosomal protein S7 id=3619761 bin=GWC2_OP3_44_8 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
30S ribosomal protein S7
cg1_0.2_scaffold_3805_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(2682..3053)
DNA (372bp) protein (124aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Omnitr_03
30S ribosomal protein S12 id=3619763 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rpsL; 30S ribosomal protein S12
cg1_0.2_scaffold_3805_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3055..7104)
DNA (4050bp) protein (1350aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) Tax=CG_Omnitr_03
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=4218950 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_3805_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7076..10768)
DNA (3693bp) protein (1231aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Omnitr_03
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4769376 bin=GWA2_OP3_52_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cg1_0.2_scaffold_3805_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(10786..11217)
DNA (432bp) protein (144aa)
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Omnitr_03
50S ribosomal protein L7/L12 id=3686053 bin=GWF2_OP3_38_59 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rplL; 50S ribosomal protein L7/L12
cg1_0.2_scaffold_3805_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(11298..11849)
DNA (552bp) protein (184aa)
50S ribosomal protein L10 n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DPY0_HALPG
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=CG_Omnitr_03
50S ribosomal protein L10
cg1_0.2_scaffold_3805_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(11864..12559)
DNA (696bp) protein (232aa)
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CG_Omnitr_03
50S ribosomal protein L1 id=4218946 bin=GWF2_OP3_43_52 species=uncultured bacterium AOCefta2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
50S ribosomal protein L1
cg1_0.2_scaffold_3805_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(12559..13068)
DNA (510bp) protein (170aa)
50S ribosomal protein L11 Tax=CG_Omnitr_03
50S ribosomal protein L11 id=4553185 bin=GWC2_OP3_44_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
50S ribosomal protein L11
cg1_0.2_scaffold_3805_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(13070..13600)
DNA (531bp) protein (177aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=CG_Omnitr_03
Transcription antitermination protein nusG id=4769381 bin=GWA2_OP3_52_12 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
NusG antitermination factor
cg1_0.2_scaffold_3805_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(13613..13804)
DNA (192bp) protein (64aa)
Protein translocase subunit SecE n=2 Tax=Geobacter sulfurreducens RepID=D7AMV3_GEOSK
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=CG_Omnitr_03
secE; preprotein translocase subunit SecE
cg1_0.2_scaffold_3805_c_trna_1
unknown

Not on your lists

comp(13942..14015)
DNA (74bp)
transferRNA
cg1_0.2_scaffold_3805_c_13
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


comp(14138..14290)
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL33_SOLUE rbh
50S ribosomal protein L33
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
cg1_0.2_scaffold_3805_c_14
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

comp(14301..15503)
DNA (1203bp) protein (401aa)
Elongation factor Tu id=3619757 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
tuf2; elongation factor Tu 2
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Displaying 15 items

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