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cg1_0.2_scaffold_4068_c

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4068_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1..333)
DNA (333bp) protein (111aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_4068_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(341..1999)
DNA (1659bp) protein (553aa)
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=CG_Omnitr_03
Type II secretion system protein E (GspE) id=3571977 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
general secretory pathway protein E
cg1_0.2_scaffold_4068_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1996..2517)
DNA (522bp) protein (174aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=CG_Omnitr_
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) (EC:3.1.3.45)
Phenylphosphate carboxylase, gamma subunit id=2180022 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cg1_0.2_scaffold_4068_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(2538..3500)
DNA (963bp) protein (321aa)
hypothetical protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=CG_Omnitr_03
Uncharacterized protein id=4817838 bin=GWC2_OP3_44_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
cg1_0.2_scaffold_4068_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3583..4557)
DNA (975bp) protein (325aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=CG_Omnitr_03
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQU6_9CLOT
cg1_0.2_scaffold_4068_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(4559..5815)
DNA (1257bp) protein (419aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=CG_Omnitr_03
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLY2_9BACT
cg1_0.2_scaffold_4068_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5812..6993)
DNA (1182bp) protein (394aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=CG_Omnitr_03
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=4123614 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_4068_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7005..7742)
DNA (738bp) protein (246aa)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=CG_Omnitr_03
Nucleotidyl transferase id=4621166 bin=GWC2_OP3_44_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
cg1_0.2_scaffold_4068_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7739..8782)
DNA (1044bp) protein (348aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=CG_Omnitr_03
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Thermincola potens (strain JR) RepID=D5XCA5_THEPJ
cg1_0.2_scaffold_4068_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(8790..10580)
DNA (1791bp) protein (597aa)
PtsA; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=CG_Omnitr_03
Phosphoenolpyruvate-protein phosphotransferase id=4621163 bin=GWC2_OP3_44_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
PtsA; phosphoenolpyruvate-protein kinase
cg1_0.2_scaffold_4068_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10583..10852)
DNA (270bp) protein (90aa)
fruB; phosphotransferase system HPr-related protein; K11189 phosphocarrier protein Tax=CG_Omnitr_03
Phosphotransferase system HPr-related protein id=4123608 bin=GWF2_OP3_43_52 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
fruB; phosphotransferase system HPr-related protein
cg1_0.2_scaffold_4068_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10855..11322)
DNA (468bp) protein (156aa)
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=CG_Omnitr_03
Putative PTS IIA-like nitrogen-regulatory protein PtsN id=4986268 bin=GWA2_OP3_53_43 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
cg1_0.2_scaffold_4068_c_trna_4
unknown

Not on your lists

comp(11465..11536)
DNA (72bp)
transferRNA
cg1_0.2_scaffold_4068_c_trna_3
unknown

Not on your lists

comp(11552..11633)
DNA (82bp)
transferRNA
cg1_0.2_scaffold_4068_c_trna_2
unknown

Not on your lists

comp(11813..11885)
DNA (73bp)
transferRNA
cg1_0.2_scaffold_4068_c_trna_1
unknown

Not on your lists

comp(11952..12025)
DNA (74bp)
transferRNA
cg1_0.2_scaffold_4068_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(12027..13814)
DNA (1788bp) protein (596aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=CG_Omnitr_03
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG id=2850135 bin=GWF2_OP3_43_52 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG
cg1_0.2_scaffold_4068_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(13963..14190)
DNA (228bp) protein (76aa)
integrase catalytic subunit Tax=CG_Omnitr_03
Transposase id=2882652 bin=GWF2_OP3_43_52 species=Pseudomonas sp. GM25 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Displaying 18 items

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