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cg1_0.2_scaffold_4065_c

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4065_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3..680
DNA (678bp) protein (226aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=15193418 bin=GWC2_NOV_55_46 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_NOV_55_46 organism_group=Proteobacteria
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
NAD-dependent epimerase/dehydratase Tax=CG_Omnitr_03
cg1_0.2_scaffold_4065_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

671..1792
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037393D1
geranylgeranyl reductase Tax=CG_Omnitr_03
geranylgeranyl reductase
cg1_0.2_scaffold_4065_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1789..2043
DNA (255bp) protein (85aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_4065_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(2046..3398)
DNA (1353bp) protein (451aa)
diguanylate cyclase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3DD28
diguanylate cyclase/phosphodiesterase Tax=CG_Omnitr_03
diguanylate cyclase/phosphodiesterase
cg1_0.2_scaffold_4065_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3528..5459
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B35051
TPR Domain containing protein Tax=CG_Omnitr_03
hypothetical protein
cg1_0.2_scaffold_4065_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

5456..5947
DNA (492bp) protein (164aa)
nuclease precursor (EC:3.1.31.1); K01174 micrococcal nuclease [EC:3.1.31.1] Tax=CG_Omnitr_03
nuclease precursor (EC:3.1.31.1)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003687712
cg1_0.2_scaffold_4065_c_trna_1
unknown

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6033..6114
DNA (82bp)
transferRNA
cg1_0.2_scaffold_4065_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

6076..6609
DNA (534bp) protein (178aa)
SsrA-binding protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYZ5_THEOJ
SsrA-binding protein; K03664 SsrA-binding protein Tax=CG_Omnitr_03
SsrA-binding protein
cg1_0.2_scaffold_4065_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

7144..8262
DNA (1119bp) protein (373aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=CG_Omnitr_03
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Protein containing Cell wall hydrolase/autolysin, catalytic domain (Fragment) id=2050207 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cg1_0.2_scaffold_4065_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

8262..9095
DNA (834bp) protein (278aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=CG_Omnitr_03
glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=2886467 bin=GWC2_OP3_44_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
cg1_0.2_scaffold_4065_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

9088..9435
DNA (348bp) protein (116aa)
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=CG_Omnitr_03
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase id=4127778 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg1_0.2_scaffold_4065_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

9428..10075
DNA (648bp) protein (216aa)
queuosine biosynthesis protein QueC Tax=CG_Omnitr_03
7-cyano-7-deazaguanine synthase id=2050200 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
queuosine biosynthesis protein QueC
cg1_0.2_scaffold_4065_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

10069..10752
DNA (684bp) protein (228aa)
Organic radical activating enzyme n=1 Tax=sediment metagenome RepID=D9PIC0_9ZZZZ
radical SAM protein Tax=CG_Omnitr_03
radical SAM protein
cg1_0.2_scaffold_4065_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

10749..11141
DNA (393bp) protein (131aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=CG_Omnitr_03
NADPH-dependent 7-cyano-7-deazaguanine reductase id=2050115 bin=GWB2_CP_45_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
NADPH-dependent 7-cyano-7-deazaguanine reductase
cg1_0.2_scaffold_4065_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

11138..11971
DNA (834bp) protein (278aa)
fumarase subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] Tax=CG_Omnitr_03
fumarase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit id=3572154 bin=GWF2_OP3_43_52 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_4065_c_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

11973..12464
DNA (492bp) protein (164aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta (EC:4.2.1.2); K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=CG_Omnitr_03
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit id=3572155 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_4065_c_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


12503..13120
DNA (618bp) protein (206aa)
nucleoside-triphosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=CG_Omnitr_03
Non-canonical purine NTP pyrophosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D467_PELTS
nucleoside-triphosphatase
cg1_0.2_scaffold_4065_c_17
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(13122..15164)
DNA (2043bp) protein (681aa)
Putative uncharacterized protein Tax=CG_Omnitr_03
Putative uncharacterized protein id=3706858 bin=GWF2_OP3_43_52 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_4065_c_trna_2
unknown

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15269..15343
DNA (75bp)
transferRNA
cg1_0.2_scaffold_4065_c_trna_3
unknown

Not on your lists

15770..15843
DNA (74bp)
transferRNA
cg1_0.2_scaffold_4065_c_18
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

16101..16562
DNA (462bp) protein (154aa)
id=1899191 Tax=RBG_13_Berkelbacteria_40_8_curated
id=1899191 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cg1_0.2_scaffold_4065_c_trna_4
unknown

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16574..16647
DNA (74bp)
transferRNA
cg1_0.2_scaffold_4065_c_19
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(16643..18145)
DNA (1503bp) protein (501aa)
recombinase Tax=CG_Omnitr_03
Recombinase id=4123802 bin=GWF2_OP3_43_52 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
recombinase
Displaying 23 items

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