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cg1_0.2_scaffold_4167_c

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4167_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3..707
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036FD621
thiamine biosynthesis protein Tax=CG_Omnitr_03
thiamine biosynthesis protein ThiI
cg1_0.2_scaffold_4167_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

723..1172
DNA (450bp) protein (150aa)
NifU domain-containing protein; K04488 nitrogen fixation protein NifU and related proteins Tax=CG_Omnitr_03
Fe-S iron-sulfur cluster assembly protein, NifU family id=1736134 bin=GWD2_Nitrospirae-related_57_8 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NifU domain-containing protein
cg1_0.2_scaffold_4167_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1215..1796
DNA (582bp) protein (194aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=CG_Omnitr_03
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVJ5_ALKMQ
5-formyltetrahydrofolate cyclo-ligase
cg1_0.2_scaffold_4167_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1884..3446
DNA (1563bp) protein (521aa)
hypothetical protein Tax=CG_Omnitr_03
Ribonuclease Y id=4202715 bin=GWF2_OP3_43_52 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
cg1_0.2_scaffold_4167_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3455..4234
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003783729
calcineurin-like phosphoesterase; K09769 hypothetical protein Tax=CG_Omnitr_03
calcineurin-like phosphoesterase
cg1_0.2_scaffold_4167_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

4239..5381
DNA (1143bp) protein (381aa)
xseA; Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) (EC:3.1.11.6) Tax=CG_Omnitr_03
xseA; Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit id=4202763 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cg1_0.2_scaffold_4167_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

5378..5614
DNA (237bp) protein (79aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=CG_Omnitr_03
Exodeoxyribonuclease 7 small subunit n=2 Tax=Geobacter sulfurreducens RepID=EX7S_GEOSL rbh
xseB; exodeoxyribonuclease VII small subunit
cg1_0.2_scaffold_4167_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

5607..7499
DNA (1893bp) protein (631aa)
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=CG_Omnitr_03
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B66D67
deoxyxylulose-5-phosphate synthase
cg1_0.2_scaffold_4167_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

7599..8942
DNA (1344bp) protein (448aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=CG_Omnitr_03
Glutamate--tRNA ligase id=4712340 bin=GWC2_OP3_44_8 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
glutamyl-tRNA synthetase
cg1_0.2_scaffold_4167_c_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(8953..10695)
DNA (1743bp) protein (581aa)
Recombinase id=4202777 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
resolvase domain-containing protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
cg1_0.2_scaffold_4167_c_trna_1
unknown

Not on your lists

8957..9027
DNA (71bp)
transferRNA
cg1_0.2_scaffold_4167_c_11
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

10893..11114
DNA (222bp) protein (74aa)
id=4202778 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
cg1_0.2_scaffold_4167_c_12
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

11204..11770
DNA (567bp) protein (189aa)
RNA polymerase sigma factor, sigma-70 family, ECF subfamily
id=4202779 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
cg1_0.2_scaffold_4167_c_13
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

11834..12109
DNA (276bp) protein (92aa)
Putative uncharacterized protein id=4202780 bin=GWF2_OP3_43_52 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
cg1_0.2_scaffold_4167_c_14
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

12106..12228
DNA (123bp) protein (41aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
cg1_0.2_scaffold_4167_c_15
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

12215..12463
DNA (249bp) protein (83aa)
id=4202782 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=4202782 Tax=GWF2_WOR_2_43_52_curated
cg1_0.2_scaffold_4167_c_16
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

12482..13282
DNA (801bp) protein (267aa)
Putative uncharacterized protein id=4712375 bin=GWC2_OP3_44_8 species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
Displaying 17 items

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