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cg1_0.2_scaffold_2818_c

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_2818_c_1
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:ACN98959.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ACN98959.1};; TaxID=204536 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;
Aspartate aminotransferase n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DT60_SULAA
cg1_0.2_scaffold_2818_c_2
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(352..639)
DNA (288bp) protein (96aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
cg1_0.2_scaffold_2818_c_3
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(642..908)
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
cg1_0.2_scaffold_2818_c_4
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(976..1881)
DNA (906bp) protein (302aa)
tRNA pseudouridine32 synthase/23S rRNA pseudouridine746 synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HF48_9BRAD
signal peptide protein
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
cg1_0.2_scaffold_2818_c_5
unknown

Not on your lists

comp(1878..2003)
DNA (126bp) protein (42aa)

This feature has no annotations

cg1_0.2_scaffold_2818_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(2091..2648)
DNA (558bp) protein (186aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=CG_Omnitr_03
50S ribosomal protein L17 id=3910577 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rplQ; 50S ribosomal protein L17
cg1_0.2_scaffold_2818_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(2671..3657)
DNA (987bp) protein (329aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=CG_Omnitr_03
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=4170996 bin=GWC2_OP3-like_45_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
cg1_0.2_scaffold_2818_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(3738..4364)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZN9_THEOJ
rpsD; ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Omnitr_03
30S ribosomal protein S4
cg1_0.2_scaffold_2818_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(4371..4775)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9K1_9BACI
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Omnitr_03
30S ribosomal protein S11
cg1_0.2_scaffold_2818_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(4861..5256)
DNA (396bp) protein (132aa)
30S ribosomal protein S13 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZN7_THEOJ
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Omnitr_03
30S ribosomal protein S13
cg1_0.2_scaffold_2818_c_11
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5261..5374)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Sutterella RepID=E7H4U1_9BURK
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=742821 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Suttere
rpmJ; 50S ribosomal protein L36
cg1_0.2_scaffold_2818_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5376..5594)
DNA (219bp) protein (73aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=CG_Omnitr_03
Translation initiation factor IF-1 id=2002100 bin=GWB2_CP_45_9 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
infA; translation initiation factor IF-1
cg1_0.2_scaffold_2818_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5587..6336)
DNA (750bp) protein (250aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=CG_Omnitr_03
Methionine aminopeptidase n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APJ2_9BACT
methionine aminopeptidase
cg1_0.2_scaffold_2818_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(6317..6976)
DNA (660bp) protein (220aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=CG_Omnitr_03
Adenylate kinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RRN3_9CLOT
adenylate kinase
cg1_0.2_scaffold_2818_c_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(6982..8331)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00035E46C4
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Omnitr_03
secY; preprotein translocase subunit SecY
cg1_0.2_scaffold_2818_c_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(8335..8778)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=RL15_SYNWW rbh
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=CG_Omnitr_03
50S ribosomal protein L15
cg1_0.2_scaffold_2818_c_17
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(8765..9250)
DNA (486bp) protein (162aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=CG_Omnitr_03
30S ribosomal protein S5 id=2963933 bin=GWF2_Lentisphaerae_57_35 species=Sporosarcina newyorkensis genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
30S ribosomal protein S5
cg1_0.2_scaffold_2818_c_18
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(9263..9625)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=RL18_HELMI rbh
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=CG_Omnitr_03
rplR; 50S ribosomal protein L18
cg1_0.2_scaffold_2818_c_19
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(9645..10181)
DNA (537bp) protein (179aa)
ribosomal protein L6, bacterial type Tax=CG_Omnitr_03
ribosomal protein L6 id=4769328 bin=GWA2_OP3_52_12 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
ribosomal protein L6, bacterial type
cg1_0.2_scaffold_2818_c_20
unknown

Not on your lists

comp(10169..10285)
DNA (117bp) protein (39aa)

This feature has no annotations

cg1_0.2_scaffold_2818_c_21
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(10295..10693)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RS8_GEOUR rbh
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=CG_Omnitr_03
rpsH; 30S ribosomal protein S8
cg1_0.2_scaffold_2818_c_22
GWC2_OP11_41_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(10770..10955)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TXH0_SULAD
30S ribosomal protein S14 type Z {ECO:0000313|EMBL:KKS19475.1}; TaxID=1618487 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_41_7.;"
30S ribosomal protein S14
cg1_0.2_scaffold_2818_c_23
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(10960..11505)
DNA (546bp) protein (182aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=CG_Omnitr_03
50S ribosomal protein L5 id=3868635 bin=GWC2_OP3_44_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rplE; 50S ribosomal protein L5
cg1_0.2_scaffold_2818_c_24
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(11505..11813)
DNA (309bp) protein (103aa)
50S ribosomal protein L24 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RL24_MOOTA rbh
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=CG_Omnitr_03
rplX; 50S ribosomal protein L24
cg1_0.2_scaffold_2818_c_25
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(11814..12182)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B70561
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=CG_Omnitr_03
rplN; 50S ribosomal protein L14
cg1_0.2_scaffold_2818_c_26
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(12283..12540)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Sulfobacillus acidophilus RepID=F8I5P3_SULAT
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=CG_Omnitr_03
rpsQ; 30S ribosomal protein S17
cg1_0.2_scaffold_2818_c_27
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(12524..12730)
DNA (207bp) protein (69aa)
Tax=CG_Omnitr_03
cg1_0.2_scaffold_2818_c_28
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(12733..13149)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RL16_HALOH id=5223107 bin=16ft_combo_ws3_JS1 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=CG_Omnitr_03
rplP; 50S ribosomal protein L16
cg1_0.2_scaffold_2818_c_29
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(13118..13801)
DNA (684bp) protein (228aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=CG_Omnitr_03
30S ribosomal protein S3 id=5029040 bin=GWA2_OP3_53_43 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
rpsC; 30S ribosomal protein S3
cg1_0.2_scaffold_2818_c_30
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(13805..14230)
DNA (426bp) protein (142aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=CG_Omnitr_03
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 id=5029039 bin=GWA2_OP3_53_43 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Displaying items 1-30 of 37 in total

View Taxonomy