ggKbase home page

cg1_0.2_scaffold_6713_c

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_6713_c_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1..492)
DNA (492bp) protein (164aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=CG_Omnitr_03
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 id=4832878 bin=GWC2_OP3_44_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
cg1_0.2_scaffold_6713_c_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(517..1242)
DNA (726bp) protein (242aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=CG_Omnitr_03
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TQ53_9FIRM
cg1_0.2_scaffold_6713_c_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1246..2538)
DNA (1293bp) protein (431aa)
PurB; adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=CG_Omnitr_03
Adenylosuccinate lyase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ53_PELTS
PurB; adenylosuccinate lyase
cg1_0.2_scaffold_6713_c_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(2698..3117)
DNA (420bp) protein (140aa)
30S ribosomal protein S6 Tax=CG_Omnitr_03
30S ribosomal protein S6 id=2106126 bin=GWA2_CPR4_42_17 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
cg1_0.2_scaffold_6713_c_trna_2
unknown

Not on your lists

comp(3277..3348)
DNA (72bp)
transferRNA
cg1_0.2_scaffold_6713_c_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3328..3702)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225AAAB
yabR; hypothetical protein; K07571 S1 RNA binding domain protein Tax=CG_Omnitr_03
yabR; hypothetical protein
cg1_0.2_scaffold_6713_c_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3677..3973)
DNA (297bp) protein (99aa)
Septum formation initiator Tax=CG_Omnitr_03
Septum formation initiator id=4832874 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
cg1_0.2_scaffold_6713_c_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(3981..5261)
DNA (1281bp) protein (427aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=CG_Omnitr_03
enolase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036A6D66
cg1_0.2_scaffold_6713_c_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5251..5850)
DNA (600bp) protein (200aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=CG_Omnitr_03
Phosphoribosylglycinamide formyltransferase id=2850067 bin=GWF2_OP3_43_52 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
phosphoribosylglycinamide formyltransferase
cg1_0.2_scaffold_6713_c_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5883..6920)
DNA (1038bp) protein (346aa)
Ferredoxin n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JQ92_9THEM
2Fe-2S iron-sulfur cluster binding domain protein Tax=CG_Omnitr_03
2Fe-2S iron-sulfur cluster binding domain protein
cg1_0.2_scaffold_6713_c_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(6917..7243)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Pelosinus fermentans JBW45 RepID=I8U430_9FIRM
trxA2; thioredoxin TrxA2; K03671 thioredoxin 1 Tax=CG_Omnitr_03
thioredoxin
cg1_0.2_scaffold_6713_c_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(7360..8151)
DNA (792bp) protein (264aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VVN4_CLOBI
RnfABCDGE type electron transport complex subunit B Tax=CG_Omnitr_03
RnfABCDGE type electron transport complex subunit B
cg1_0.2_scaffold_6713_c_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(8151..8759)
DNA (609bp) protein (203aa)
RnfABCDGE type electron transport complex subunit A; K03617 electron transport complex protein RnfA Tax=CG_Omnitr_03
Electron transport complex, RnfABCDGE type, A subunit id=2850079 bin=GWF2_OP3_43_52 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RnfABCDGE type electron transport complex subunit A
cg1_0.2_scaffold_6713_c_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(8763..9377)
DNA (615bp) protein (205aa)
rnfE; electron transport complex protein RsxE; K03613 electron transport complex protein RnfE Tax=CG_Omnitr_03
RnfE id=3707666 bin=GWC2_OP3_44_8 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
nqrD; electron transport complex protein RsxE
cg1_0.2_scaffold_6713_c_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(9364..9789)
DNA (426bp) protein (142aa)
Electron transport complex protein RnfG n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBL0_DEFDS
rnfG; electron transport complex protein RnfG; K03612 electron transport complex protein RnfG Tax=CG_Omnitr_03
rnfG; electron transport complex protein RnfG
cg1_0.2_scaffold_6713_c_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(9786..10721)
DNA (936bp) protein (312aa)
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD Tax=CG_Omnitr_03
Electron transport complex, RnfABCDGE type, D subunit id=2850091 bin=GWF2_OP3_43_52 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RnfABCDGE type electron transport complex subunit D
cg1_0.2_scaffold_6713_c_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10718..12034)
DNA (1317bp) protein (439aa)
Electron transport complex protein RnfC n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVI8_MAHA5
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC Tax=CG_Omnitr_03
RnfABCDGE type electron transport complex subunit C
cg1_0.2_scaffold_6713_c_17
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(12308..13225)
DNA (918bp) protein (306aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=CG_Omnitr_03
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000364FB64
thioredoxin reductase
cg1_0.2_scaffold_6713_c_18
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(13218..14483)
DNA (1266bp) protein (422aa)
arabinose efflux permease family protein Tax=CG_Omnitr_03
Major facilitator superfamily MFS_1 id=3707662 bin=GWC2_OP3_44_8 species=unknown genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
arabinose efflux permease family protein
cg1_0.2_scaffold_6713_c_trna_1
unknown

Not on your lists

comp(14622..14694)
DNA (73bp)
transferRNA
cg1_0.2_scaffold_6713_c_19
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(14801..16960)
DNA (2160bp) protein (720aa)
putative histidine kinase (EC:2.7.13.3) Tax=CG_Omnitr_03
putative histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase id=4808423 bin=GWC2_OP3-like_45_7 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
cg1_0.2_scaffold_6713_c_20
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(17023..18003)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B78183
nucleoside-diphosphate-sugar epimerase Tax=CG_Omnitr_03
nucleoside-diphosphate-sugar epimerase
cg1_0.2_scaffold_6713_c_21
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(18003..18092)
DNA (90bp) protein (30aa)
PAS/PAC sensor protein Tax=CG_Omnitr_03
Displaying 23 items

View Taxonomy