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bjp_ig3402_scaffold_2543

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2543_1
unknown

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1..399
DNA (399bp) protein (133aa)

This feature has no annotations

bjp_ig3402_scaffold_2543_2
R_WOR_2_50_17, WOR-2, Bacteria

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402..848
DNA (447bp) protein (149aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
bjp_ig3402_scaffold_2543_3
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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884..1747
DNA (864bp) protein (288aa)
multi-sensor signal transduction histidine kinase Tax=RBG_13_WOR_2_41_10_curated
PAS domain S-box protein id=3686150 bin=GWF2_OP3_38_59 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
integral membrane sensor signal transduction histidine kinase
bjp_ig3402_scaffold_2543_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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1790..2185
DNA (396bp) protein (132aa)
sporulation initiation phosphotransferase F (EC:2.7.-.-)
Sigma-54 dependent two component transcriptional regulator (Fis family protein) id=4802006 bin=GWC2_OP3_44_8 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
sigma-54 dependent two component transcriptional regulator (Fis family protein) Tax=GWF2_WOR_2_43_52_curated
bjp_ig3402_scaffold_2543_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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2192..2578
DNA (387bp) protein (129aa)
phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Two component transcriptional regulator, winged helix family id=4802009 bin=GWC2_OP3_44_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
bjp_ig3402_scaffold_2543_6

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2737..3468
DNA (732bp) protein (244aa)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG52_THET1
Marine sediment metagenome DNA, contig: S03H2_C02587 {ECO:0000313|EMBL:GAH29884.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NAD+ synthetase
bjp_ig3402_scaffold_2543_7
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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3588..4100
DNA (513bp) protein (171aa)
NADH dehydrogenase 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_13_Planctomycetes_63_9_curated
hymA; [Fe] hydrogenase subunit (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit id=4732021 bin=GWC2_Syntrophobacterales_56_13 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
bjp_ig3402_scaffold_2543_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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4097..5950
DNA (1854bp) protein (618aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Tax=CG_Delta_05
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit id=4732022 bin=GWC2_Syntrophobacterales_56_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
NADH dehydrogenase
bjp_ig3402_scaffold_2543_9

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5962..6651
DNA (690bp) protein (230aa)
Marine sediment metagenome DNA, contig: S01H1_L04052 {ECO:0000313|EMBL:GAF80004.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2Fe-2S and 4Fe-4S iron-sulfur protein id=4732023 bin=GWC2_Syntrophobacterales_56_13 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
ferredoxin
bjp_ig3402_scaffold_2543_10
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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6679..8265
DNA (1587bp) protein (529aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SEN1_CALK2 rbh
ferredoxin-dependent glutamate synthase Tax=RBG_13_OP3X_46_9_curated
ferredoxin-dependent glutamate synthase
bjp_ig3402_scaffold_2543_11
R_WOR_2_50_17, WOR-2, Bacteria

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8353..9954
DNA (1602bp) protein (534aa)
pyrG; CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
CTP synthase (EC:6.3.4.2)
CTP synthase id=4542896 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159 rbh
bjp_ig3402_scaffold_2543_12
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10112..11647)
DNA (1536bp) protein (512aa)
glutamine synthetase, type I (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RBG_16_Deltaproteobacteria_49_23_curated
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase id=4827576 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Displaying 12 items

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