ggKbase home page

bjp_ig3402_scaffold_2866

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2866_1
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(171..830)
DNA (660bp) protein (220aa)
RNA polymerase sigma factor n=1 Tax=Prevotella oris F0302 RepID=D1QTJ0_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" so
RNA polymerase sigma-70 factor
bjp_ig3402_scaffold_2866_2
unknown

Not on your lists

1248..1409
DNA (162bp) protein (54aa)

This feature has no annotations

bjp_ig3402_scaffold_2866_3
unknown

Not on your lists

comp(1391..1552)
DNA (162bp) protein (54aa)

This feature has no annotations

bjp_ig3402_scaffold_2866_4
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1613..2377)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFP2_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47799.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteriu
bjp_ig3402_scaffold_2866_5
Halomonas sp. GFAJ-1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2440..3087)
DNA (648bp) protein (216aa)
Kinesin K39 {ECO:0000313|EMBL:EHK62112.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-1.;"
bjp_ig3402_scaffold_2866_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3208..3387)
DNA (180bp) protein (60aa)
Conserved domain protein {ECO:0000313|EMBL:EES50033.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoN
bjp_ig3402_scaffold_2866_7
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3403..3984)
DNA (582bp) protein (194aa)
Similar to DNA repair protein RadC n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q559_9BACT
Similar to DNA repair protein RadC {ECO:0000313|EMBL:CAJ75146.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;
DNA repair protein
bjp_ig3402_scaffold_2866_8
unknown

Not on your lists

comp(4013..4282)
DNA (270bp) protein (90aa)

This feature has no annotations

bjp_ig3402_scaffold_2866_9
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..4941)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARM2_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK99992.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propio
bjp_ig3402_scaffold_2866_10
Vibrio mimicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4944..5258)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Vibrio mimicus VM573 RepID=D2YK74_VIBMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEW12338.1}; TaxID=671076 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio mimicus VM573.;"
bjp_ig3402_scaffold_2866_11
unknown

Not on your lists

comp(5248..5742)
DNA (495bp) protein (165aa)

This feature has no annotations

bjp_ig3402_scaffold_2866_12
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(5750..6427)
DNA (678bp) protein (226aa)
prophage MuSo1, DNA transposition protein id=152370 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Prophage MuSo1 DNA transposition protein putative {ECO:0000313|EMBL:CCX80320.1}; TaxID=1262834 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samp
prophage MuSo1, DNA transposition protein
bjp_ig3402_scaffold_2866_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(6424..8532)
DNA (2109bp) protein (703aa)
Integrase catalytic region n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LS99_9FUSO rbh
Integrase catalytic region {ECO:0000313|EMBL:CDE91694.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacteriu
integrase catalytic region
bjp_ig3402_scaffold_2866_14
unknown

Not on your lists

comp(8532..8840)
DNA (309bp) protein (103aa)

This feature has no annotations

bjp_ig3402_scaffold_2866_15

Not on your lists

comp(8837..9277)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y1R0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD36780.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig3402_scaffold_2866_16
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9359..9637)
DNA (279bp) protein (93aa)
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA33659.1}; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima
bjp_ig3402_scaffold_2866_17

Not on your lists

9659..10576
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZFU2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD36779.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type II secretion system protein
Displaying 17 items

View Taxonomy