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bjp_ig3402_scaffold_3015

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3015_1
CG_Omnitr_01, Omnitrophica, Bacteria

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comp(1..3843)
DNA (3843bp) protein (1281aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) Tax=CG_Omnitr_01
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=4218950 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig3402_scaffold_3015_2
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(3848..7255)
DNA (3408bp) protein (1136aa)
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Omnitr_01
rpoB; DNA-directed RNA polymerase subuit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4218949 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig3402_scaffold_3015_3
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists


comp(7308..7694)
DNA (387bp) protein (129aa)
ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Omnitr_01
50S ribosomal protein L7/L12 id=4553191 bin=GWC2_OP3_44_8 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
50S ribosomal protein L7/L12
bjp_ig3402_scaffold_3015_4
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists


comp(7728..8267)
DNA (540bp) protein (180aa)
50S ribosomal protein L10 n=1 Tax=Brachyspira intermedia (strain ATCC 51140 / PWS/A) RepID=G0EMR6_BRAIP
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RBG_13_WOR-2_44_8b_curated
rplJ; 50S ribosomal protein L10
bjp_ig3402_scaffold_3015_5
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists


comp(8264..8947)
DNA (684bp) protein (228aa)
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CG_Omnitr_01
50S ribosomal protein L1 id=4553187 bin=GWC2_OP3_44_8 species=uncultured bacterium AOCefta2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
LSU ribosomal protein L1P
bjp_ig3402_scaffold_3015_6
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists


comp(8931..9371)
DNA (441bp) protein (147aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Omnitr_01
50S ribosomal protein L11 id=3686059 bin=GWF2_OP3_38_59 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
50S ribosomal protein L11
bjp_ig3402_scaffold_3015_7
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

comp(9378..9905)
DNA (528bp) protein (176aa)
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG Tax=RBG_13_WOR-2_44_8b_curated
Transcription antitermination protein nusG id=4218944 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
transcription antitermination protein nusG
bjp_ig3402_scaffold_3015_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(9953..10165)
DNA (213bp) protein (71aa)
Preprotein translocase subunit secE id=4218943 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Preprotein translocase subunit secE Tax=GWF2_WOR_2_43_52_curated
secE; protein SecE
bjp_ig3402_scaffold_3015_trna_2
unknown

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comp(10190..10260)
DNA (71bp)
transferRNA
bjp_ig3402_scaffold_3015_trna_1
unknown

Not on your lists

comp(10436..10508)
DNA (73bp)
transferRNA
Displaying 10 items

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