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bjp_ig3402_scaffold_3780

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3780_1
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(1..1143)
DNA (1143bp) protein (381aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=GWF2_WOR_2_43_52_curated
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase id=4217561 bin=GWC2_OP3_44_8 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
bjp_ig3402_scaffold_3780_2
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(1144..1920)
DNA (777bp) protein (259aa)
biotin biosynthesis protein BioC; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
Malonyl-CoA O-methyltransferase BioC id=4716577 bin=GWA2_OP3_53_43 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
bioC; malonyl-CoA O-methyltransferase
bjp_ig3402_scaffold_3780_3
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(1917..2711)
DNA (795bp) protein (265aa)
alpha/beta hydrolase fold protein; K02170 pimelyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] Tax=GWA2_WOR_2_45_18_curated
Alpha/beta hydrolase fold protein id=4404635 bin=GWF2_OP3_38_59 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
alpha/beta hydrolase fold protein
bjp_ig3402_scaffold_3780_4
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(2699..3871)
DNA (1173bp) protein (391aa)
bioF; 8-amino-7-oxononanoate synthase; K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
8-amino-7-oxononanoate synthase id=2152036 bin=GWB2_CP_45_9 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 rbh
bioF; 8-amino-7-oxononanoate synthase
bjp_ig3402_scaffold_3780_5
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3876..4859)
DNA (984bp) protein (328aa)
bioB; biotin synthase; K01012 biotin synthetase [EC:2.8.1.6] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Biotin synthase id=4745307 bin=GWC2_OP3_44_8 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
bioB; biotin synthase
bjp_ig3402_scaffold_3780_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(4949..5905)
DNA (957bp) protein (319aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=CG_Omnitr_03
Biotin/acetyl-CoA-carboxylase ligase id=4716580 bin=GWA2_OP3_53_43 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3 rbh
BirA; biotin-(acetyl-CoA carboxylase) ligase
bjp_ig3402_scaffold_3780_7
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(5902..7068)
DNA (1167bp) protein (389aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=CG_Omnitr_01
Cysteine desulfurase id=2152031 bin=GWB2_CP_45_9 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cysteine desulfurase NifS
bjp_ig3402_scaffold_3780_8
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7065..7871)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACL9_CARHZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB13670.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothe
bjp_ig3402_scaffold_3780_9
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(7902..8132)
DNA (231bp) protein (77aa)
nitrogen-fixing protein NifU n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000370F3FF
nitrogen-fixing NifU domain-containing protein Tax=CG_Omnitr_01
nitrogen fixation protein NifU
bjp_ig3402_scaffold_3780_10
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(8157..8597)
DNA (441bp) protein (147aa)
Rrf2 family DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K0_GEMAT
AsnC family transcriptional regulator Tax=CG_Omnitr_01
transcriptional regulator, Rrf2 family
bjp_ig3402_scaffold_3780_11
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(8815..9024)
DNA (210bp) protein (70aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] Tax=RBG_13_OP3X_46_9_curated
Alkyl hydroperoxide reductase subunit F id=4168192 bin=GWF2_OP3_43_52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ahpF; alkyl hydroperoxide reductase subunit
Displaying 11 items

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