ggKbase home page

bjp_ig3402_scaffold_4012

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_4012_1
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(306..1343)
DNA (1038bp) protein (346aa)
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
Chorismate synthase id=2849635 bin=GWF2_OP3_43_52 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
chorismate synthase
bjp_ig3402_scaffold_4012_2
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(1558..2349)
DNA (792bp) protein (264aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Omnitr_01
Type 4 prepilin-like proteins leader peptide-processing enzyme id=4188511 bin=GWF2_OP3_38_59 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
prepilin peptidase
bjp_ig3402_scaffold_4012_3
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

comp(2346..3176)
DNA (831bp) protein (277aa)
AroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RBG_13_WOR-2_44_8b_curated
Shikimate dehydrogenase id=4188512 bin=GWF2_OP3_38_59 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
shikimate 5-dehydrogenase
bjp_ig3402_scaffold_4012_4
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(3191..3775)
DNA (585bp) protein (195aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein id=2241541 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
bjp_ig3402_scaffold_4012_5
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(3775..5280)
DNA (1506bp) protein (502aa)
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Omnitr_01
2-isopropylmalate synthase id=2241540 bin=GWB2_CP_45_9 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 rbh
2-isopropylmalate synthase
bjp_ig3402_scaffold_4012_6
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(5494..6486)
DNA (993bp) protein (331aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
ilvC; putative ketol-acid reductoisomerase Tax=RBG_13_WOR_2_41_10_curated
Ketol-acid reductoisomerase IlvC id=2241539 bin=GWB2_CP_45_9 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 rbh
bjp_ig3402_scaffold_4012_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6518..6973)
DNA (456bp) protein (152aa)
seg 213..222 id=1246437 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
seg 213..222 Tax=RBG_16_Deltaproteobacteria_64_85_curated
bjp_ig3402_scaffold_4012_8
unknown

Not on your lists

comp(6970..7278)
DNA (309bp) protein (103aa)

This feature has no annotations

bjp_ig3402_scaffold_4012_9
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(7304..7774)
DNA (471bp) protein (157aa)
ilvH; acetolactate synthase small subunit IlvH (EC:2.2.1.6) Tax=RBG_13_WOR_2_41_10_curated
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase small subunit IlvH id=4123633 bin=GWF2_OP3_43_52 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig3402_scaffold_4012_10
RLO_RIF_OD1_05_38_22, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists


comp(7805..8185)
DNA (381bp) protein (127aa)
30S ribosomal protein S23 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_05_38_22_curated
S23 ribosomal protein id=84198 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
30S ribosomal protein S23
bjp_ig3402_scaffold_4012_11
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists

comp(8231..8668)
DNA (438bp) protein (146aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_13_WOR_2_44_8_curated
Acetolactate synthase id=4123631 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
acetolactate synthase large subunit
Displaying 11 items

View Taxonomy