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bjp_ig3402_scaffold_1507

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_1507_1
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

comp(3..983)
DNA (981bp) protein (327aa)
histidinol-phosphate aminotransferase Tax=RBG_13_WOR-2_44_8b_curated
Histidinol-phosphate aminotransferase id=4113633 bin=GWF2_OP3_43_52 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
histidinol-phosphate aminotransferase
bjp_ig3402_scaffold_1507_2
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(998..2059)
DNA (1062bp) protein (354aa)
pheA; bifunctional chorismate mutase/prephenate dihydratase (EC:4.2.1.51 5.4.99.5) Tax=RBG_13_WOR_2_41_10_curated
Chorismate mutase id=4113634 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
chorismate mutase
bjp_ig3402_scaffold_1507_3
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(2073..2735)
DNA (663bp) protein (221aa)
segregation and condensation protein B; K06024 segregation and condensation protein B Tax=CG_Omnitr_01
Segregation and condensation protein B id=3814605 bin=GWC2_OP3-like_45_7 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
scpB; segregation and condensation protein B
bjp_ig3402_scaffold_1507_4
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(2735..3355)
DNA (621bp) protein (207aa)
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RBG_13_WOR_2_41_10_curated
Holliday junction ATP-dependent DNA helicase RuvA id=4113636 bin=GWF2_OP3_43_52 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ruvA; RuvA
bjp_ig3402_scaffold_1507_5
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(3352..3852)
DNA (501bp) protein (167aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RBG_13_WOR_2_41_10_curated
ruvC; crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=2293996 bin=GWB2_CP_45_9 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
bjp_ig3402_scaffold_1507_6
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(3860..4612)
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
Probable transcriptional regulatory protein NPH_1078 id=4113639 bin=GWF2_OP3_43_52 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
bjp_ig3402_scaffold_1507_7
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(5187..5696)
DNA (510bp) protein (170aa)
ribonuclease HI (EC:3.1.26.4)
ribonuclease H Tax=RBG_13_WOR_2_41_10_curated
Ribonuclease H id=4012181 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig3402_scaffold_1507_8
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(5644..6351)
DNA (708bp) protein (236aa)
hypothetical protein; K07164 Tax=CG_Omnitr_01
Putative uncharacterized protein id=4012179 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
bjp_ig3402_scaffold_1507_trna_2
unknown

Not on your lists

comp(6406..6479)
DNA (74bp)
transferRNA
bjp_ig3402_scaffold_1507_trna_1
unknown

Not on your lists

comp(6561..6632)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_1507_9
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(6809..8386)
DNA (1578bp) protein (526aa)
sigA; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=CG_Omnitr_01
RNA polymerase sigma factor id=4735749 bin=GWC2_OP3_44_8 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rpoD; RNA polymerase sigma factor rpoD
bjp_ig3402_scaffold_1507_10
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(8367..10163)
DNA (1797bp) protein (599aa)
DNA primase, catalytic core Tax=CG_Omnitr_01
DNA primase id=2079773 bin=GWB2_CP_45_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
dnaG; DNA primase
bjp_ig3402_scaffold_1507_11
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(10188..11150)
DNA (963bp) protein (321aa)
hypothetical protein Tax=CG_Elusi_02
Putative uncharacterized protein id=3240382 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
bjp_ig3402_scaffold_1507_12
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(11177..11767)
DNA (591bp) protein (197aa)
Putative uncharacterized protein Tax=CG_Omnitr_01
Putative uncharacterized protein id=2079763 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
bjp_ig3402_scaffold_1507_13
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

11911..13101
DNA (1191bp) protein (397aa)
diguanylate cyclase Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
Diguanylate cyclase id=4155072 bin=GWC2_OP3_44_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
diguanylate cyclase
bjp_ig3402_scaffold_1507_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(13118..13303)
DNA (186bp) protein (62aa)
Tax=CSP1_2_Dadabacteria
bjp_ig3402_scaffold_1507_15
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(13334..16573)
DNA (3240bp) protein (1080aa)
chromosome segregation ATPase; K03529 chromosome segregation protein Tax=CG_Omnitr_01
Chromosome partition protein Smc id=1703679 bin=GWB2_CP_45_9 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 rbh
chromosome segregation protein SMC
bjp_ig3402_scaffold_1507_16
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(16574..17152)
DNA (579bp) protein (193aa)
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=CG_Omnitr_01
Putative electron transfer flavoprotein alpha-subunit (EtfA and 4Fe-4S ferredoxin modules) id=4568843 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
electron transfer flavoprotein subunit alpha
Displaying 18 items

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