ggKbase home page

bjp_ig3402_scaffold_1764

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_1764_1
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(2..301)
DNA (300bp) protein (100aa)
orotate phosphoribosyltransferase Tax=RBG_13_WOR_2_41_10_curated
Orotate phosphoribosyltransferase id=3574448 bin=GWA2_OP3_53_43 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
orotate phosphoribosyltransferase
bjp_ig3402_scaffold_1764_2
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

517..1242
DNA (726bp) protein (242aa)
phosphoribosyltransferase Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
Phosphoribosyltransferase id=2088343 bin=GWB2_CP_45_9 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
ComFC; amidophosphoribosyltransferase
bjp_ig3402_scaffold_1764_3
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

1246..2343
DNA (1098bp) protein (366aa)
permease Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
Permease id=3571940 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
lptF; lipopolysaccharide ABC transporter membrane protein LptF
bjp_ig3402_scaffold_1764_4
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

2331..3416
DNA (1086bp) protein (362aa)
permease Tax=CG_Omnitr_01
Permease YjgP/YjgQ family protein id=4801962 bin=GWC2_OP3_44_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
permease
bjp_ig3402_scaffold_1764_5
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(3475..4608)
DNA (1134bp) protein (378aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=CG_Omnitr_01
alanine racemase (EC:5.1.1.1)
Alanine racemase id=2088333 bin=GWB2_CP_45_9 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
bjp_ig3402_scaffold_1764_6
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(4611..5303)
DNA (693bp) protein (231aa)
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
Glycoprotease protein family member id=2088330 bin=GWB2_CP_45_9 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
bjp_ig3402_scaffold_1764_7
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(5300..5809)
DNA (510bp) protein (170aa)
Tax=CG_Omnitr_01
bjp_ig3402_scaffold_1764_8
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

comp(5821..6345)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IPS7_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
bjp_ig3402_scaffold_1764_9
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists

comp(6349..7266)
DNA (918bp) protein (306aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase id=4012284 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
bjp_ig3402_scaffold_1764_10
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(7256..8305)
DNA (1050bp) protein (350aa)
translation initiation factor 2B subunit I (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RBG_13_WOR_2_41_10_curated
translation initiation factor 2B subunit I (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=4072573 bin=GWC2_OP3_44_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
bjp_ig3402_scaffold_1764_11
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(8306..9421)
DNA (1116bp) protein (372aa)
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
Putative uncharacterized protein id=4012278 bin=GWF2_OP3_43_52 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
bjp_ig3402_scaffold_1764_12
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

comp(9411..10193)
DNA (783bp) protein (261aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
Hydrolase, TatD family id=2285008 bin=GWB2_CP_45_9 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
deoxyribonuclease, TatD Mg-dependent
bjp_ig3402_scaffold_1764_13
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists


comp(10197..11687)
DNA (1491bp) protein (497aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=2285007 bin=GWB2_CP_45_9 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 rbh
bjp_ig3402_scaffold_1764_14
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(11688..12482)
DNA (795bp) protein (265aa)
PSP1 domain-containing protein Tax=RBG_13_WOR_2_41_10_curated
Signal peptidase II-like protein (Fragment) id=2711833 bin=GWC2_OP3_44_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
signal peptidase-like protein
bjp_ig3402_scaffold_1764_15
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(12473..13453)
DNA (981bp) protein (327aa)
DNA polymerase III subunit delta' (EC:2.7.7.7) Tax=CG_Omnitr_01
DNA polymerase III, delta' subunit n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K468_HALHC
DNA polymerase III, delta' subunit
bjp_ig3402_scaffold_1764_16
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(13435..14055)
DNA (621bp) protein (207aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RBG_13_WOR_2_41_10_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=2285003 bin=GWB2_CP_45_9 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
bjp_ig3402_scaffold_1764_17
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14052..14531)
DNA (480bp) protein (160aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037F341A
cysteinyl-tRNA synthetase
bjp_ig3402_scaffold_1764_18
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14543..14953)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKI8_9FIRM
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
hypothetical protein
bjp_ig3402_scaffold_1764_19
unknown

Not on your lists

comp(14956..15315)
DNA (360bp) protein (120aa)

This feature has no annotations

bjp_ig3402_scaffold_1764_20
unknown

Not on your lists

comp(15319..15513)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 20 items

View Taxonomy