ggKbase home page

bjp_ig3402_scaffold_1793

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_1793_1
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..825
DNA (825bp) protein (275aa)
Oxidoreductase domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJQ5_DESAA
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
oxidoreductase domain-containing protein
bjp_ig3402_scaffold_1793_2
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

Not on your lists

822..1688
DNA (867bp) protein (289aa)
Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K9X4_HALHC
acylneuraminate cytidylyltransferase Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase
bjp_ig3402_scaffold_1793_3
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1700..2989
DNA (1290bp) protein (430aa)
aminotransferase, class III pyridoxal-phosphate dependent; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
Aminotransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0B0E9_SYNWW rbh
aminotransferase, class III pyridoxal-phosphate dependent
bjp_ig3402_scaffold_1793_4
Frischella perrara, Frischella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2986..4458
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003626005 rbh
pseudaminic acid biosynthesis-associated protein PseG
Pseudaminic acid biosynthesis-associated protein PseG {ECO:0000313|EMBL:AJA44710.1}; TaxID=1267021 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Frischella.;" source="Fris
bjp_ig3402_scaffold_1793_5
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4463..5518
DNA (1056bp) protein (352aa)
pseudaminic acid synthase (EC:2.5.1.56) Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
pseudaminic acid synthase (EC:2.5.1.56)
Pseudaminic acid synthase id=2171018 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
bjp_ig3402_scaffold_1793_6
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

5620..6063
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR9_9BACT
hypothetical protein Tax=RBG_16_Planctomycetes_41_13_curated
hypothetical protein
bjp_ig3402_scaffold_1793_7
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

6056..6502
DNA (447bp) protein (149aa)
id=4035147 Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
id=4035147 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
bjp_ig3402_scaffold_1793_8
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

6648..6944
DNA (297bp) protein (99aa)
Putative ribonuclease VapC {ECO:0000313|EMBL:KKR30038.1}; TaxID=1618450 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
Probable ribonuclease VapC id=2737789 bin=GWC2_CP_Nitrospirae-rel_42_7 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PilT protein domain protein
bjp_ig3402_scaffold_1793_9
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

6956..7210
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR30037.1}; TaxID=1618450 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
Putative uncharacterized protein id=2737786 bin=GWC2_CP_Nitrospirae-rel_42_7 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
bjp_ig3402_scaffold_1793_10
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7517..9412
DNA (1896bp) protein (632aa)
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
bjp_ig3402_scaffold_1793_11
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9513..10079
DNA (567bp) protein (189aa)
Acetyltransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0B0F2_SYNWW
acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
acetyltransferase
bjp_ig3402_scaffold_1793_12
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10214..11086
DNA (873bp) protein (291aa)
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
bjp_ig3402_scaffold_1793_13
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11052..13097
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGZ4_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02344.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula form
bjp_ig3402_scaffold_1793_14
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

13125..13445
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TIM6_CALNY
S23 ribosomal Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S23 ribosomal protein
bjp_ig3402_scaffold_1793_15
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13527..15005
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BTM1_9BACT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
polysaccharide biosynthesis protein
bjp_ig3402_scaffold_1793_16
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15002..15361
DNA (360bp) protein (120aa)
methyltransferase Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein id=128746 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
bjp_ig3402_scaffold_1793_17
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15372..16106
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK71_DESAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL02746.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfat
bjp_ig3402_scaffold_1793_18
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16176..16562
DNA (387bp) protein (129aa)
membrane protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
bjp_ig3402_scaffold_1793_19

Not on your lists

16559..17464
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A0Y6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD55542.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methylase
bjp_ig3402_scaffold_1793_20
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

17516..18379
DNA (864bp) protein (288aa)
Methyltransferase FkbM family {ECO:0000313|EMBL:KKS01438.1}; TaxID=1618415 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
Methyltransferase FkbM family id=4408226 bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6
FkbM family methyltransferase
bjp_ig3402_scaffold_1793_21
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18393..19193
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI000313B5FA
Uncharacterized protein {ECO:0000313|EMBL:GAK41113.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
group 1 glycosyl transferase
Displaying 21 items

View Taxonomy