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ACD10_159_4

Organism: ACD10

near complete RP 47 / 55 MC: 19 BSCG 44 / 51 MC: 10 ASCG 0 / 38
Location: 1586..1819

Top 3 Functional Annotations

Value Algorithm Source
Protein hfq n=6 Tax=Rhodobacterales RepID=HFQ_RHOS1 (db=UNIREF evalue=4.0e-37 bit_score=156.0 identity=94.81 coverage=97.4358974358974) similarity UNIREF
DB: UNIREF
  • Identity: 94.81
  • Coverage: 97.44
  • Bit_score: 156
  • Evalue 4.00e-37
hfq; RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 77.0
  • Bit_score: 154
  • Evalue 1.10e-35
Hfq: RNA chaperone Hfq (db=HMMTigr db_id=TIGR02383 from=6 to=66 evalue=3.8e-44 interpro_id=IPR005001 interpro_description=Host factor Hfq GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.78e-44

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Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCCGCAGACAAACAGAATTTGCAGGATGCCTTTCTGAACCACGTTCGGAAATCTAAAGTTCCGGTGACGATTTTCCTGATCAATGGCGTCAAACTACAGGGCGTCATTACTTGGTTTGACAATTTCTGTGTTTTGCTGCGCCGCGACGGGCAATCGCAACTGGTCTATAAGCATGCGATTTCGACCATCATGCCGGGCGGCCCGGTGAACCTGTATGAAGGTGAAGACTGA
PROTEIN sequence
Length: 78
MAADKQNLQDAFLNHVRKSKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTIMPGGPVNLYEGED*