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MEL_B1_2_38

Organism: Melainabacteria_B1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 0 / 38
Location: 29522..29839

Top 3 Functional Annotations

Value Algorithm Source
rpsJ; 30S ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 105.0
  • Bit_score: 158
  • Evalue 1.10e-36
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=32 to=47 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsJ_bact: ribosomal protein S10 (db=HMMTigr db_id=TIGR01049 from=7 to=105 evalue=4.0e-66 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.00e-66

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Taxonomy

Acinetobacter sp. CAG:196 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGACAACAGCTAAAAGACAAAGAATTAGAGTTTGTTTAAGATCATACGAACACAAATTAGTTGACGTATCAGCTGAAAAAATCGTTGAAACAGCAAAAAGAACAGACGCTAAGGTAGCAGGTCCTATTCCTTTACCTACAAAAAGACGTATCTATTGTGTATTGCGTTCACCACACGTAGACAAGAAGTCAAGAGAACACTTCGAAATCCGTACGCACAAACGCATTATCGATATTTACGAACCTACTCAACAGACAACTGAAGAATTGAGCAGGTTAGATTTGCCGGCTGGCGTAGATATTGAAGTAAAACTGTAA
PROTEIN sequence
Length: 106
MTTAKRQRIRVCLRSYEHKLVDVSAEKIVETAKRTDAKVAGPIPLPTKRRIYCVLRSPHVDKKSREHFEIRTHKRIIDIYEPTQQTTEELSRLDLPAGVDIEVKL*