Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpsM; 30S ribosomal protein S13 | similarity |
KEGG
DB: KEGG |
68.0 | 122.0 | 163 | 3.00e-38 | cmd:B841_02670 |
seg (db=Seg db_id=seg from=42 to=52) | iprscan |
interpro
DB: Seg |
null | null | null | null | cmd:B841_02670 |
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=114 evalue=3.8e-70 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.80e-70 | cmd:B841_02670 |
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=121 evalue=8.3e-51 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 8.30e-51 | cmd:B841_02670 |
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=121 evalue=8.3e-51) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 8.30e-51 | cmd:B841_02670 |
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=115 evalue=2.6e-48 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 2.60e-48 | cmd:B841_02670 |
S13-like H2TH domain (db=superfamily db_id=SSF46946 from=2 to=120 evalue=5.0e-42 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.00e-42 | cmd:B841_02670 |
(db=HMMPfam db_id=PF00416 from=3 to=108 evalue=1.6e-37 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-37 | cmd:B841_02670 |
no description (db=Gene3D db_id=G3DSA:1.10.8.50 from=1 to=71 evalue=1.3e-21) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.30e-21 | cmd:B841_02670 |
no description (db=Gene3D db_id=G3DSA:4.10.910.10 from=72 to=121 evalue=2.8e-15) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.80e-15 | cmd:B841_02670 |
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=111 evalue=38.739 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 3.87e+01 | cmd:B841_02670 |
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clost |
UNIPROT
DB: UniProtKB |
100.0 | 121.0 | 242 | 2.50e-61 | R6PEH9_9CLOT | |
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 alias=MEL_C2_C00001G00852 id=471125 tax=MEL_C2 species=unknown genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria | similarity |
UNIREF
DB: UNIREF90 |
81.0 | null | 199 | 7.10e-49 | cmd:B841_02670 |