name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
MEL_B2_2_1
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria
|
Not on your lists |
comp(3..2612)
|
hemolysin-type calcium-binding protein
seg (db=Seg db_id=seg from=185 to=197)
seg (db=Seg db_id=seg from=258 to=267)
seg (db=Seg db_id=seg from=840 to=856)
|
|
MEL_B2_2_2
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
2794..4710
|
DNA primase (EC:2.7.7.-)
DNA primase (EC:2.7.7.-)
DNA primase n=13 Tax=Clostridium RepID=B1QBB1_CLOBO (db=UNIREF evalue=0.0 bit_score=345.0 identity=33.0 coverage=91.07981220657277)
seg (db=Seg db_id=seg from=617 to=633)
|
|
MEL_B2_2_3
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
4710..5786
|
RNA polymerase sigma factor n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M5L2_9FIRM (db=UNIREF evalue=0.0 bit_score=433.0 identity=62.9 coverage=96.93593314763231)
rpoD; putative RNA polymerase sigma factor RpoD
rpoD; putative RNA polymerase sigma factor RpoD
SIGMA70_2 (db=PatternScan db_id=PS00716 from=317 to=343 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
|
|
MEL_B2_2_4
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(5832..6152)
|
Q3J7N3_NITOC_Q3J7N3; (db=BlastProDom db_id=PD170898 from=28 to=105 evalue=1.0e-06)
Uncharacterized protein {ECO:0000313|EMBL:CDC19506.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
|
|
MEL_B2_2_5
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(6169..6540)
|
Q7VG23_HELHP_Q7VG23; (db=BlastProDom db_id=PD170898 from=23 to=99 evalue=0.0002)
Uncharacterized protein {ECO:0000313|EMBL:CDC19507.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_6
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
6713..6865
|
6713..6865 + ( gc_cont=0.261)
Uncharacterized protein {ECO:0000313|EMBL:CDC19508.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_7
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
6992..7144
|
6992..7144 + ( gc_cont=0.307)
Uncharacterized protein {ECO:0000313|EMBL:CDC19509.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_8
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
7185..7511
|
hypothetical protein
Uncharacterised conserved protein, Gp-49 type (db=HMMPIR db_id=PIRSF028744 from=3 to=108 evalue=5.7e-32 interpro_id=IPR014056 interpro_description=Addiction module killer protein, predicted)
|
|
MEL_B2_2_9
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
7504..7800
|
hypothetical protein (db=KEGG evalue=3.1e-07 bit_score=60.0 identity=32.2 coverage=88.88888888888889)
Putative uncharacterized protein n=7 Tax=Pseudomonas syringae group RepID=F3INW7_PSESL (db=UNIREF evalue=3.1e-07 bit_score=60.0 identity=32.2 coverage=88.88888888888889)
seg (db=Seg db_id=seg from=52 to=67)
(db=HMMPfam db_id=PF01381 from=56 to=95 evalue=9.2e-08 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
|
|
MEL_B2_2_10
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(7847..10666)
|
Flagellin and related hook-associated protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J9S7_9ALTE (db=UNIREF evalue=8.6e-43 bit_score=181.0 identity=21.4 coverage=89.25531914893618)
Flagellin and related hook-associated proteins
seg (db=Seg db_id=seg from=912 to=928)
coiled-coil (db=Coil db_id=coil from=875 to=896 evalue=NA)
|
|
MEL_B2_2_11
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(10809..11336)
|
seg (db=Seg db_id=seg from=33 to=55)
Uncharacterized protein {ECO:0000313|EMBL:CDC18529.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_12
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
11479..13260
|
hypothetical protein
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=1 to=240 evalue=2.6e-53 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=60 to=584 evalue=8.0e-51)
TPR-like (db=superfamily db_id=SSF48452 from=5 to=307 evalue=6.8e-46)
|
|
MEL_B2_2_13
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
13260..13625
|
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
seg (db=Seg db_id=seg from=48 to=66)
Tetrahydrobiopterin biosynthesis enzymes-like (db=superfamily db_id=SSF55620 from=1 to=119 evalue=2.0e-39)
queuosine_QueD: queuosine biosynthesis (db=HMMTigr db_id=TIGR03367 from=3 to=96 evalue=1.6e-37 interpro_id=IPR007115 interpro_description=6-pyruvoyl tetrahydropterin synthase-related GO=Molecular Function: 6-pyruvoyltetrahydropterin synthase activity (GO:0003874), Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: metal ion binding (GO:0046872))
|
|
MEL_B2_2_14
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
13648..14493
|
uppP; Undecaprenyl-diphosphatase (EC:3.6.1.27)
seg (db=Seg db_id=seg from=171 to=186)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=68)
|
|
MEL_B2_2_15
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
14584..15054
|
seg (db=Seg db_id=seg from=48 to=76)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=79 to=91 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
EF_HAND_2 (db=ProfileScan db_id=PS50222 from=77 to=101 evalue=9.185 interpro_id=IPR018249 interpro_description=EF-HAND 2)
Uncharacterized protein {ECO:0000313|EMBL:CDC18511.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_16
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(15209..15499)
|
hypothetical protein
seg (db=Seg db_id=seg from=40 to=56)
(db=HMMPfam db_id=PF06949 from=17 to=88 evalue=3.6e-13 interpro_id=IPR009711 interpro_description=Uncharacterised protein family UPF0473)
UPF0473 protein Helmi_02360 {ECO:0000313|EMBL:CDC18510.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostri
|
|
MEL_B2_2_17
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(15522..15938)
|
Putative Holliday junction resolvase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KXY7_9FIRM (db=UNIREF evalue=1.4e-26 bit_score=125.0 identity=49.6 coverage=97.84172661870504)
hypothetical protein
(db=HMMPfam db_id=PF03652 from=3 to=136 evalue=2.5e-41 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
RNAse_H_YqgF: RNAse H-fold protein YqgF (db=HMMTigr db_id=TIGR00250 from=5 to=135 evalue=2.8e-41 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
|
|
MEL_B2_2_18
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(15940..17589)
|
seg (db=Seg db_id=seg from=455 to=468)
seg (db=Seg db_id=seg from=416 to=433)
seg (db=Seg db_id=seg from=239 to=247)
Uncharacterized protein {ECO:0000313|EMBL:CDC18508.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_19
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(17604..17876)
|
(db=HMMPfam db_id=PF06689 from=32 to=66 evalue=1.2e-12 interpro_id=IPR010603 interpro_description=Zinc finger, ClpX C4-type GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: protein dimerization activity (GO:0046983))
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=31 to=68 evalue=2.0e-08)
ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX (db=HMMPanther db_id=PTHR11262:SF4 from=30 to=81 evalue=0.00057 interpro_id=IPR004487 interpro_description=Clp protease, ATP-binding subunit ClpX GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein folding (GO:0006457), Molecular Function: unfolded protein binding (GO:0051082))
HSL AND CLP PROTEASE (db=HMMPanther db_id=PTHR11262 from=30 to=81 evalue=0.00057)
|
|
MEL_B2_2_20
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
18005..18655
|
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Cyanothece sp. PCC 8802 RepID=C7QP60_CYAP0 (db=UNIREF evalue=2.1e-08 bit_score=65.0 identity=25.7 coverage=82.94930875576037)
coiled-coil (db=Coil db_id=coil from=174 to=195 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
|
|
MEL_B2_2_21
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
18655..19449
|
lgt; prolipoprotein diacylglyceryl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=226)
transmembrane_regions (db=TMHMM db_id=tmhmm from=236 to=258)
seg (db=Seg db_id=seg from=236 to=257)
|
|
MEL_B2_2_22
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(19492..21582)
|
seg (db=Seg db_id=seg from=208 to=223)
seg (db=Seg db_id=seg from=361 to=377)
seg (db=Seg db_id=seg from=626 to=656)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=165)
|
|
MEL_B2_2_23
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
21789..23066
|
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Fischerella sp. JSC-11 RepID=G6FZ12_9CYAN (db=UNIREF evalue=0.0 bit_score=376.0 identity=43.9 coverage=97.88732394366197)
seg (db=Seg db_id=seg from=5 to=26)
|
|
MEL_B2_2_24
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
23072..24151
|
Threonine synthase n=3 Tax=Sulfurihydrogenibium RepID=B2V7U9_SULSY (db=UNIREF evalue=0.0 bit_score=468.0 identity=64.8 coverage=96.94444444444444)
thrC_2; threonine synthase (EC:4.2.3.1)
thrC_2; threonine synthase (EC:4.2.3.1)
seg (db=Seg db_id=seg from=22 to=31)
|
|
MEL_B2_2_25
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
24221..24859
|
1-acyl-sn-glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate (1)-acyltransferase (db=superfamily db_id=SSF69593 from=14 to=209 evalue=3.2e-32)
1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE (db=HMMPanther db_id=PTHR10434 from=31 to=196 evalue=5.5e-24)
no description (db=HMMSmart db_id=SM00563 from=52 to=164 evalue=1.1e-18 interpro_id=IPR002123 interpro_description=Phospholipid/glycerol acyltransferase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring acyl groups (GO:0016746))
|
|
MEL_B2_2_26
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
24897..25592
|
1-acyl-sn-glycerol-3-phosphate acyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Glycerol-3-phosphate (1)-acyltransferase (db=superfamily db_id=SSF69593 from=1 to=212 evalue=1.7e-33)
1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE (db=HMMPanther db_id=PTHR10434 from=10 to=207 evalue=2.6e-26)
|
|
MEL_B2_2_27
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(25921..26640)
|
16S rRNA (guanine(527)-N(7))-methyltransferase GidB
coiled-coil (db=Coil db_id=coil from=175 to=196 evalue=NA)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=4 to=239 evalue=1.0e-55)
gidB: 16S rRNA methyltransferase GidB (db=HMMTigr db_id=TIGR00138 from=25 to=219 evalue=3.1e-51 interpro_id=IPR003682 interpro_description=rRNA small subunit methyltransferase G GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA methyltransferase activity (GO:0008649))
|
|
MEL_B2_2_28
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(26630..29125)
|
seg (db=Seg db_id=seg from=778 to=790)
seg (db=Seg db_id=seg from=4 to=20)
coiled-coil (db=Coil db_id=coil from=455 to=476 evalue=NA)
HCP-like (db=superfamily db_id=SSF81901 from=481 to=722 evalue=2.1e-15)
|
|
MEL_B2_2_29
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(29152..30423)
|
3-deoxy-D-manno-octulosonic-acid transferase
seg (db=Seg db_id=seg from=17 to=31)
seg (db=Seg db_id=seg from=111 to=125)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
|
|
MEL_B2_2_30
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(30489..31229)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
Uncharacterized protein {ECO:0000313|EMBL:CDC18496.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|