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MEL_B2_2

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Displaying items 331-338 of 338 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MEL_B2_2_331
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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333246..334343
DNA (1098bp) protein (366aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Thermincola potens JR RepID=D5XFF5_THEPJ (db=UNIREF evalue=0.0 bit_score=272.0 identity=41.1 coverage=94.26229508196722)
flagellar biosynthetic protein FlhB
seg (db=Seg db_id=seg from=243 to=255)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=51)
MEL_B2_2_332
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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334346..335017
DNA (672bp) protein (224aa)
Sel1 domain protein repeat-containing protein
Sel1 domain protein repeat-containing protein n=1 Tax=Odoribacter splanchnicus DSM 20712 RepID=F9Z945_ODOSD (db=UNIREF evalue=1.4e-23 bit_score=116.0 identity=33.7 coverage=83.48214285714286)
seg (db=Seg db_id=seg from=121 to=136)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=11 to=215 evalue=2.8e-19 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
MEL_B2_2_333
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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335086..336018
DNA (933bp) protein (311aa)
integral membrane sensor signal transduction histidine kinase
seg (db=Seg db_id=seg from=138 to=148)
coiled-coil (db=Coil db_id=coil from=67 to=91 evalue=NA)
TWO-COMPONENT SYSTEM HISTIDINE KINASE, FRRD (db=HMMPanther db_id=PTHR23283:SF33 from=1 to=298 evalue=2.7e-46)
MEL_B2_2_334
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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comp(336019..336909)
DNA (891bp) protein (297aa)
L-serine dehydratase
seg (db=Seg db_id=seg from=176 to=182)
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
sda_alpha: L-serine dehydratase, iron-sulfu (db=HMMTigr db_id=TIGR00718 from=1 to=296 evalue=1.2e-83 interpro_id=IPR004642 interpro_description=Serine dehydratase, alpha subunit GO=Molecular Function: L-serine ammonia-lyase activity (GO:0003941), Biological Process: gluconeogenesis (GO:0006094))
MEL_B2_2_335
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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comp(336906..337583)
DNA (678bp) protein (226aa)
sdhB; L-serine dehydratase (EC:4.3.1.17)
seg (db=Seg db_id=seg from=64 to=71)
L-serine dehydratase, beta subunit (db=HMMPIR db_id=PIRSF036692 from=1 to=222 evalue=7.4e-78 interpro_id=IPR004643 interpro_description=Iron-sulphur-dependent L-serine dehydratase beta subunit GO=Molecular Function: L-serine ammonia-lyase activity (GO:0003941), Biological Process: gluconeogenesis (GO:0006094))
sda_beta: L-serine dehydratase, iron-sulfur- (db=HMMTigr db_id=TIGR00719 from=3 to=208 evalue=5.4e-60 interpro_id=IPR004643 interpro_description=Iron-sulphur-dependent L-serine dehydratase beta subunit GO=Molecular Function: L-serine ammonia-lyase activity (GO:0003941), Biological Process: gluconeogenesis (GO:0006094))
MEL_B2_2_336
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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comp(337596..339257)
DNA (1662bp) protein (554aa)
kdc; alpha-keto-acid decarboxylase (EC:4.1.1.-)
kdc; alpha-keto-acid decarboxylase (EC:4.1.1.-)
Pyruvate decarboxylase isozyme 1 n=1 Tax=Providencia rettgeri DSM 1131 RepID=D4C3A5_PRORE (db=UNIREF evalue=0.0 bit_score=417.0 identity=40.2 coverage=96.75090252707581)
seg (db=Seg db_id=seg from=512 to=521)
MEL_B2_2_337
Clostridium sp. CAG:306, Melainabacteria, Bacteria

Not on your lists

339439..340836
DNA (1398bp) protein (466aa)
putative major facilitator superfamily protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=341 to=360)
transmembrane_regions (db=TMHMM db_id=tmhmm from=365 to=387)
transmembrane_regions (db=TMHMM db_id=tmhmm from=400 to=422)
MEL_B2_2_338
unknown

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340958..341026
DNA (69bp) protein (23aa)
340958..341026 + ( gc_cont=0.348)
Displaying items 331-338 of 338 in total

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