name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
MEL_B2_2_301
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
303408..303755
|
XRE family transcriptional regulator
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=3 to=79 evalue=2.3e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=13 to=75 evalue=3.3e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=16 to=71 evalue=9.0e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
|
|
MEL_B2_2_302
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(303943..305814)
|
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFJ8_CARHZ (db=UNIREF evalue=0.0 bit_score=689.0 identity=58.1 coverage=95.67307692307693)
ftsH; cell division protein FtsH
ftsH; cell division protein FtsH
seg (db=Seg db_id=seg from=595 to=606)
|
|
MEL_B2_2_303
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
305950..306471
|
305950..306471 + ( gc_cont=0.354)
Uncharacterized protein {ECO:0000313|EMBL:CDC18538.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_304
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria
|
Not on your lists |
comp(306567..307397)
|
metal dependent phosphohydrolase
(db=HMMPfam db_id=PF01966 from=147 to=265 evalue=8.5e-09 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
Metal dependent phosphohydrolase n=1 Tax=Methanobacterium sp. SWAN-1 RepID=F6D367_METSW alias=MEL_C2_C00001G00489 id=471415 tax=MEL_C2 species=Methanobacterium sp. SWAN-1 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCZ51541.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental sampl
|
|
MEL_B2_2_305
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
307582..308586
|
nucleotidyl transferase
seg (db=Seg db_id=seg from=17 to=28)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=4 to=334 evalue=1.2e-78)
MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF15 from=4 to=334 evalue=1.2e-78)
|
|
MEL_B2_2_306
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
308616..309680
|
Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 n=1 Tax=Leptospirillum ferrooxidans C2-3 RepID=I0IN80_9BACT (db=UNIREF evalue=0.0 bit_score=351.0 identity=51.5 coverage=94.08450704225352)
phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2
phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2
DAHP_synth_Bsub: phospho-2-dehydro-3- (db=HMMTigr db_id=TIGR01361 from=70 to=333 evalue=2.2e-148 interpro_id=IPR006268 interpro_description=Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO=Biological Process: aromatic amino acid family biosynthetic process (GO:0009073), Molecular Function: aldehyde-lyase activity (GO:0016832))
|
|
MEL_B2_2_307
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
309680..309820
|
309680..309820 + ( gc_cont=0.312)
Uncharacterized protein {ECO:0000313|EMBL:CDC18570.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_308
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(309821..310807)
|
seg (db=Seg db_id=seg from=200 to=215)
Uncharacterized protein {ECO:0000313|EMBL:CDC18572.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_309
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(310884..311090)
|
310884..311090 - ( gc_cont=0.377)
Uncharacterized protein {ECO:0000313|EMBL:CDC18573.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_310
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
311301..311549
|
311301..311549 + ( gc_cont=0.410)
Uncharacterized protein {ECO:0000313|EMBL:CDC18575.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_311
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(311546..312928)
|
ATPase
seg (db=Seg db_id=seg from=141 to=153)
seg (db=Seg db_id=seg from=343 to=356)
seg (db=Seg db_id=seg from=449 to=459)
|
|
MEL_B2_2_312
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(312958..314634)
|
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=437 to=459)
transmembrane_regions (db=TMHMM db_id=tmhmm from=411 to=430)
transmembrane_regions (db=TMHMM db_id=tmhmm from=374 to=396)
|
|
MEL_B2_2_313
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(314667..315605)
|
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=9 to=297 evalue=7.9e-116 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase GO=Biological Process: tRNA processing (GO:0008033))
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE (db=HMMPanther db_id=PTHR11088:SF21 from=40 to=302 evalue=2.4e-83)
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11088 from=40 to=302 evalue=2.4e-83 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
|
|
MEL_B2_2_314
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(315589..316464)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=260)
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=172 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
|
|
MEL_B2_2_315
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
316563..318221
|
Dihydroxy-acid dehydratase n=1 Tax=Deferribacter desulfuricans SSM1 RepID=D3P8T4_DEFDS (db=UNIREF evalue=0.0 bit_score=641.0 identity=59.2 coverage=98.73417721518987)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
ILVD_EDD_2 (db=PatternScan db_id=PS00887 from=460 to=471 evalue=0.0 interpro_id=IPR020558 interpro_description=Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
|
|
MEL_B2_2_316
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
318243..318995
|
hypothetical protein
hypothetical protein
TIGR01033: DNA-binding regulatory protein, (db=HMMTigr db_id=TIGR01033 from=1 to=239 evalue=4.0e-99 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
YebC-like (db=superfamily db_id=SSF75625 from=5 to=247 evalue=4.6e-99 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
|
|
MEL_B2_2_317
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(319002..319148)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
Uncharacterized protein {ECO:0000313|EMBL:CDC18608.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_318
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
319369..321609
|
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9S2Q5_THEOJ (db=UNIREF evalue=0.0 bit_score=395.0 identity=34.4 coverage=90.49531459170014)
7TM receptor with intracellular metal dependent phosphohydrolase
7TM receptor with intracellular metal dependent phosphohydrolase
transmembrane_regions (db=TMHMM db_id=tmhmm from=396 to=418)
|
|
MEL_B2_2_319
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
321593..322126
|
rRNA maturation factor
UPF0054 (db=PatternScan db_id=PS01306 from=145 to=155 evalue=0.0 interpro_id=IPR020549 interpro_description=Uncharacterised protein family UPF0054, conserved site GO=Molecular Function: metal ion binding (GO:0046872))
TIGR00043: metalloprotein, YbeY/ UPF0054fam (db=HMMTigr db_id=TIGR00043 from=60 to=176 evalue=1.0e-37 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted GO=Molecular Function: metal ion binding (GO:0046872))
(db=HMMPfam db_id=PF02130 from=53 to=176 evalue=3.6e-36 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted GO=Molecular Function: metal ion binding (GO:0046872))
|
|
MEL_B2_2_320
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
322132..322512
|
diacylglycerol kinase
Putative uncharacterized protein n=1 Tax=Dolosigranulum pigrum ATCC 51524 RepID=H3NEU7_9LACT (db=UNIREF evalue=9.3e-17 bit_score=92.0 identity=37.1 coverage=89.76377952755905)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=117)
|
|
MEL_B2_2_321
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(322598..324598)
|
Ribonucleoside-diphosphate reductase n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8LWR6_CLOCD (db=UNIREF evalue=0.0 bit_score=715.0 identity=53.9 coverage=95.05247376311844)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
|
|
MEL_B2_2_322
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
324782..325648
|
324782..325648 + ( gc_cont=0.377)
Uncharacterized protein {ECO:0000313|EMBL:CDC18839.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_2_323
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria
|
Not on your lists |
comp(325976..326128)
|
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=49 evalue=8.2e-09 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=1 to=44 evalue=9.8e-09 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=50 evalue=3.2e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=1 to=46 evalue=11.019 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
|
|
MEL_B2_2_324
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria
|
Not on your lists |
comp(326206..326427)
|
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=69 evalue=1.6e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=10 to=73 evalue=8.7e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=13 to=68 evalue=7.6e-09 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
(db=HMMPfam db_id=PF01381 from=14 to=66 evalue=3.1e-07 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
|
|
MEL_B2_2_325
unknown
|
Not on your lists |
326515..326679
|
326515..326679 + ( gc_cont=0.291)
|
|
MEL_B2_2_326
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(326676..327620)
|
DNA polymerase III subunit gamma/tau
seg (db=Seg db_id=seg from=188 to=199)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=10 to=207 evalue=1.2e-14)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=25 to=277 evalue=8.2e-13)
|
|
MEL_B2_2_327
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(327623..328594)
|
DNA polymerase III delta subunit
seg (db=Seg db_id=seg from=14 to=25)
coiled-coil (db=Coil db_id=coil from=166 to=187 evalue=NA)
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=1 to=323 evalue=1.8e-25 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
|
|
MEL_B2_2_328
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(328635..329399)
|
metal-dependent DNA hydrolase of TatD family
seg (db=Seg db_id=seg from=183 to=201)
TATD_1 (db=PatternScan db_id=PS01137 from=2 to=10 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
TATD_3 (db=PatternScan db_id=PS01091 from=189 to=205 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
|
|
MEL_B2_2_329
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(329401..330636)
|
hypothetical protein (db=KEGG evalue=2.0e-07 bit_score=62.0 identity=20.2 coverage=86.89320388349515)
Putative uncharacterized protein n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46BH5_METBF (db=UNIREF evalue=2.6e-07 bit_score=62.0 identity=20.2 coverage=86.89320388349515)
seg (db=Seg db_id=seg from=95 to=106)
ARM repeat (db=superfamily db_id=SSF48371 from=6 to=202 evalue=1.0e-12 interpro_id=IPR016024 interpro_description=Armadillo-type fold GO=Molecular Function: binding (GO:0005488))
|
|
MEL_B2_2_330
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(330640..333096)
|
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=SYFB_SYNAS (db=UNIREF evalue=0.0 bit_score=533.0 identity=37.0 coverage=96.45909645909646)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
seg (db=Seg db_id=seg from=127 to=144)
|