Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpsD; 30S ribosomal protein S4 | similarity |
KEGG
DB: KEGG |
53.7 | 201.0 | 197 | 4.00e-48 | mbv:MBOVPG45_0246 |
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=90 to=114 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | mbv:MBOVPG45_0246 |
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=199 evalue=1.1e-93 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.10e-93 | mbv:MBOVPG45_0246 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=199 evalue=1.7e-60) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-60 | mbv:MBOVPG45_0246 |
no description (db=Gene3D db_id=G3DSA:3.10.290.10 from=91 to=199 evalue=3.1e-35 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.10e-35 | mbv:MBOVPG45_0246 |
(db=HMMPfam db_id=PF01479 from=93 to=139 evalue=2.6e-22 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.60e-22 | mbv:MBOVPG45_0246 |
no description (db=HMMSmart db_id=SM00363 from=92 to=154 evalue=2.4e-21 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.40e-21 | mbv:MBOVPG45_0246 |
(db=HMMPfam db_id=PF00163 from=3 to=91 evalue=5.2e-16 interpro_id=IPR001912 interpro_description=Ribosomal protein S4/S9, N-terminal GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.20e-16 | mbv:MBOVPG45_0246 |
30S RIBOSOMAL PROTEIN S4P (db=HMMPanther db_id=PTHR11831:SF4 from=89 to=139 evalue=2.5e-12) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.50e-12 | mbv:MBOVPG45_0246 |
30S 40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR11831 from=89 to=139 evalue=2.5e-12 interpro_id=IPR022801 interpro_description=Ribosomal protein S4/S9) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.50e-12 | mbv:MBOVPG45_0246 |
S4 (db=ProfileScan db_id=PS50889 from=92 to=152 evalue=16.446 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.64e+01 | mbv:MBOVPG45_0246 |
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr |
UNIPROT
DB: UniProtKB |
99.5 | 199.0 | 389 | 2.10e-105 | R6PL47_9CLOT | |
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 alias=MEL_C2_C00001G00854 id=471575 tax=MEL_C2 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes | similarity |
UNIREF
DB: UNIREF90 |
80.6 | null | 330 | 3.40e-88 | mbv:MBOVPG45_0246 |