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MEL_B2_2_154 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
53.7 201.0 197 4.00e-48 mbv:MBOVPG45_0246
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=90 to=114 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
null null null 0.0 mbv:MBOVPG45_0246
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=199 evalue=1.1e-93 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
null null null 1.10e-93 mbv:MBOVPG45_0246
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=199 evalue=1.7e-60) iprscan interpro
DB: superfamily
null null null 1.70e-60 mbv:MBOVPG45_0246
no description (db=Gene3D db_id=G3DSA:3.10.290.10 from=91 to=199 evalue=3.1e-35 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: Gene3D
null null null 3.10e-35 mbv:MBOVPG45_0246
(db=HMMPfam db_id=PF01479 from=93 to=139 evalue=2.6e-22 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 2.60e-22 mbv:MBOVPG45_0246
no description (db=HMMSmart db_id=SM00363 from=92 to=154 evalue=2.4e-21 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 2.40e-21 mbv:MBOVPG45_0246
(db=HMMPfam db_id=PF00163 from=3 to=91 evalue=5.2e-16 interpro_id=IPR001912 interpro_description=Ribosomal protein S4/S9, N-terminal GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
null null null 5.20e-16 mbv:MBOVPG45_0246
30S RIBOSOMAL PROTEIN S4P (db=HMMPanther db_id=PTHR11831:SF4 from=89 to=139 evalue=2.5e-12) iprscan interpro
DB: HMMPanther
null null null 2.50e-12 mbv:MBOVPG45_0246
30S 40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR11831 from=89 to=139 evalue=2.5e-12 interpro_id=IPR022801 interpro_description=Ribosomal protein S4/S9) iprscan interpro
DB: HMMPanther
null null null 2.50e-12 mbv:MBOVPG45_0246
S4 (db=ProfileScan db_id=PS50889 from=92 to=152 evalue=16.446 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.64e+01 mbv:MBOVPG45_0246
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr UNIPROT
DB: UniProtKB
99.5 199.0 389 2.10e-105 R6PL47_9CLOT
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 alias=MEL_C2_C00001G00854 id=471575 tax=MEL_C2 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes similarity UNIREF
DB: UNIREF90
80.6 null 330 3.40e-88 mbv:MBOVPG45_0246
  • SCG Annotations
  • BSCG ribosomal protein S4