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MEL_B2_8_187 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
30S ribosomal protein S3 n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MSX2_9FIRM (db=UNIREF evalue=0.0 bit_score=281.0 identity=57.1 coverage=96.73469387755102) similarity UNIREF
DB: UNIREF
57.1 96.73 281 0.0 ped:ING2D1G_1114
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
54.2 249.0 276 8.30e-72 ped:ING2D1G_1114
seg (db=Seg db_id=seg from=233 to=242) iprscan interpro
DB: Seg
null null null null ped:ING2D1G_1114
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=163 to=197 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
null null null 0.0 ped:ING2D1G_1114
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=211 evalue=6.0e-125 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
null null null 6.00e-125 ped:ING2D1G_1114
30S/40S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760 from=90 to=244 evalue=8.1e-68) iprscan interpro
DB: HMMPanther
null null null 8.10e-68 ped:ING2D1G_1114
CHLOROPLAST 30S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760:SF10 from=90 to=244 evalue=8.1e-68) iprscan interpro
DB: HMMPanther
null null null 8.10e-68 ped:ING2D1G_1114
Ribosomal protein S3 C-terminal domain (db=superfamily db_id=SSF54821 from=107 to=207 evalue=5.8e-38 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: superfamily
null null null 5.80e-38 ped:ING2D1G_1114
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=2 to=106 evalue=5.6e-37 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
null null null 5.60e-37 ped:ING2D1G_1114
no description (db=Gene3D db_id=G3DSA:3.30.1140.32 from=108 to=207 evalue=1.2e-35 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: Gene3D
null null null 1.20e-35 ped:ING2D1G_1114
(db=HMMPfam db_id=PF00189 from=119 to=202 evalue=2.5e-32 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
null null null 2.50e-32 ped:ING2D1G_1114
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=17 to=107 evalue=5.2e-28 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta) iprscan interpro
DB: Gene3D
null null null 5.20e-28 ped:ING2D1G_1114
(db=HMMPfam db_id=PF00417 from=1 to=61 evalue=1.2e-20 interpro_id=IPR008282 interpro_description=Ribosomal protein S3, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
null null null 1.20e-20 ped:ING2D1G_1114
(db=HMMPfam db_id=PF07650 from=64 to=116 evalue=2.8e-11 interpro_id=IPR004044 interpro_description=K Homology, type 2 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 2.80e-11 ped:ING2D1G_1114
no description (db=HMMSmart db_id=SM00322 from=60 to=125 evalue=0.00016 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 1.60e-04 ped:ING2D1G_1114
KH_TYPE_2 (db=ProfileScan db_id=PS50823 from=39 to=107 evalue=18.181 interpro_id=IPR004044 interpro_description=K Homology, type 2 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.82e+01 ped:ING2D1G_1114
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr UNIPROT
DB: UniProtKB
99.6 244.0 477 1.60e-131 R6PIR6_9CLOT
  • SCG Annotations
  • BSCG ribosomal protein S3