| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| putative 30S ribosomal protein S1 | rbh |
KEGG
DB: KEGG |
100.0 | 392.0 | 764 | 1.60e-218 | sln:SLUG_14290 |
| putative 30S ribosomal protein S1 | similarity |
KEGG
DB: KEGG |
100.0 | 392.0 | 764 | 1.60e-218 | sln:SLUG_14290 |
| 30S ribosomal protein S1 n=19 Tax=Staphylococcus RepID=RS1_STAEQ (db=UNIREF evalue=3.0e-177 bit_score=625.0 identity=88.01 coverage=99.4910941475827) | similarity |
UNIREF
DB: UNIREF |
88.01 | 99.49 | 625 | 3.00e-177 | sln:SLUG_14290 |
| seg (db=Seg db_id=seg from=22 to=33) | iprscan |
interpro
DB: Seg |
null | null | null | null | sln:SLUG_14290 |
| seg (db=Seg db_id=seg from=234 to=255) | iprscan |
interpro
DB: Seg |
null | null | null | null | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=16 to=34 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=111 to=127 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=128 to=145 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=331 to=349 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=292 to=311 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=214 to=235 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=157 to=177 evalue=5.0e-41 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.00e-41 | sln:SLUG_14290 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=257 to=354 evalue=8.2e-30 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 8.20e-30 | sln:SLUG_14290 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=191 to=275 evalue=3.6e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.60e-27 | sln:SLUG_14290 |
| no description (db=HMMSmart db_id=SM00316 from=192 to=262 evalue=4.1e-26 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.10e-26 | sln:SLUG_14290 |
| (db=HMMPfam db_id=PF00575 from=191 to=262 evalue=7.1e-25 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.10e-25 | sln:SLUG_14290 |
| no description (db=HMMSmart db_id=SM00316 from=277 to=348 evalue=7.8e-25 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 7.80e-25 | sln:SLUG_14290 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=116 evalue=8.5e-25 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 8.50e-25 | sln:SLUG_14290 |
| (db=HMMPfam db_id=PF00575 from=276 to=348 evalue=1.2e-22 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.20e-22 | sln:SLUG_14290 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=189 to=264 evalue=1.6e-20 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.60e-20 | sln:SLUG_14290 |
| TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=188 to=314 evalue=3.5e-20) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.50e-20 | sln:SLUG_14290 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=274 to=350 evalue=3.5e-20 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.50e-20 | sln:SLUG_14290 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=94 to=174 evalue=1.7e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-18 | sln:SLUG_14290 |
| no description (db=HMMSmart db_id=SM00316 from=14 to=90 evalue=1.3e-15 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.30e-15 | sln:SLUG_14290 |
| (db=HMMPfam db_id=PF00575 from=14 to=79 evalue=3.0e-14 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.00e-14 | sln:SLUG_14290 |
| (db=HMMPfam db_id=PF00575 from=105 to=173 evalue=1.4e-13 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-13 | sln:SLUG_14290 |
| no description (db=HMMSmart db_id=SM00316 from=106 to=173 evalue=4.8e-11 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.80e-11 | sln:SLUG_14290 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=11 to=92 evalue=1.0e-10 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.00e-10 | sln:SLUG_14290 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=103 to=175 evalue=4.0e-06 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.00e-06 | sln:SLUG_14290 |
| S1 (db=ProfileScan db_id=PS50126 from=108 to=173 evalue=17.501 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.75e+01 | sln:SLUG_14290 |
| S1 (db=ProfileScan db_id=PS50126 from=16 to=90 evalue=17.524 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.75e+01 | sln:SLUG_14290 |
| S1 (db=ProfileScan db_id=PS50126 from=279 to=348 evalue=22.991 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.30e+01 | sln:SLUG_14290 |
| S1 (db=ProfileScan db_id=PS50126 from=194 to=262 evalue=23.576 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.36e+01 | sln:SLUG_14290 |
| Putative ribosomal protein S1 {ECO:0000313|EMBL:EFU84893.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;" |
UNIPROT
DB: UniProtKB |
100.0 | 392.0 | 764 | 8.00e-218 | E6M7F0_STALU |
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