Alias: CARSLU_6
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
CARSLU_2_1
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(2..439)
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UPF0398 protein SLGD_01458 n=2 Tax=Staphylococcus lugdunensis RepID=D3QCU6_STALH (db=UNIREF evalue=1.0e-80 bit_score=301.0 identity=100.0 coverage=99.3150684931507)
hypothetical protein
(db=HMMPfam db_id=PF06908 from=1 to=146 evalue=5.7e-62 interpro_id=IPR024718 interpro_description=Domain of unknown function DUF1273)
UPF0398 protein HMPREF0790_0352 {ECO:0000256|HAMAP-Rule:MF_01575}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
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CARSLU_2_2
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(441..782)
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hypothetical protein
YppE-like (db=superfamily db_id=SSF140415 from=1 to=110 evalue=1.3e-22 interpro_id=IPR023351 interpro_description=YppE-like domain)
(db=HMMPfam db_id=PF08807 from=5 to=110 evalue=9.1e-21 interpro_id=IPR014913 interpro_description=Protein of unknown function DUF1798)
PF08807 domain protein n=5 Tax=Staphylococcus lugdunensis RepID=H3WUL5_STALU
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CARSLU_2_3
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
1751..3871
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pbp2; penicillin-binding protein 2
pbp2; penicillin-binding protein 2
Multimodular transpeptidase-transglycosylase /Penicillin-binding protein 1A/1B (PBP1) n=3 Tax=Staphylococcus lugdunensis RepID=D3QCU3_STALH (db=UNIREF evalue=0.0 bit_score=1324.0 identity=100.0 coverage=95.3323903818953)
seg (db=Seg db_id=seg from=667 to=699)
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CARSLU_2_4
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(3961..4293)
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hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU84916.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
Uncharacterized protein n=5 Tax=Staphylococcus lugdunensis RepID=K8NDR0_STALU
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CARSLU_2_5
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(4300..4959)
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Endonuclease III n=2 Tax=Staphylococcus lugdunensis RepID=D3QCU1_STALH (db=UNIREF evalue=9.0e-127 bit_score=456.0 identity=100.0 coverage=99.0909090909091)
Endonuclease III (EC:4.2.99.18)
Endonuclease III (EC:4.2.99.18)
ENDONUCLEASE_III_1 (db=PatternScan db_id=PS00764 from=189 to=205 evalue=0.0 interpro_id=IPR004035 interpro_description=Endonuclease III, iron-sulphur binding site GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
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CARSLU_2_6
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(4949..5395)
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hypothetical protein
Chromosome replication initiation protein dnaD n=2 Tax=Staphylococcus lugdunensis RepID=D3QCU0_STALH (db=UNIREF evalue=1.0e-68 bit_score=261.0 identity=98.65 coverage=98.6577181208054)
seg (db=Seg db_id=seg from=21 to=38)
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CARSLU_2_7
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(5851..6156)
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asparaginyl-tRNA synthetase (EC:6.1.1.22)
seg (db=Seg db_id=seg from=30 to=42)
ASPARTYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594:SF6 from=1 to=101 evalue=2.4e-42 interpro_id=IPR004522 interpro_description=Asparaginyl-tRNA synthetase, class IIb GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: asparagine-tRNA ligase activity (GO:0004816), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: asparaginyl-tRNA aminoacylation (GO:0006421))
ASPARTYL/LYSYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594 from=1 to=101 evalue=2.4e-42 interpro_id=IPR018150 interpro_description=Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
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CARSLU_2_8
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(7308..7523)
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DinG family ATP-dependent helicase YoaA n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT8_STALH (db=UNIREF evalue=7.0e-31 bit_score=136.0 identity=100.0 coverage=88.8888888888889)
hypothetical protein
Putative DnaQ family exonuclease/DinG family helicase {ECO:0000313|EMBL:EFU84912.1}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunens
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CARSLU_2_9
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(10021..10410)
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Biotin-protein ligase/Biotin operon repressor n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT7_STALH (db=UNIREF evalue=6.0e-71 bit_score=269.0 identity=100.0 coverage=98.4615384615385)
birA; BirA bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase synthetase
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=1 to=82 evalue=1.7e-12)
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=1 to=82 evalue=3.2e-08)
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CARSLU_2_10
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(11036..12238)
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papS; poly A polymerase family protein
papS; poly A polymerase family protein
CCA-adding enzyme n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT6_STALH (db=UNIREF evalue=0.0 bit_score=745.0 identity=99.75 coverage=99.501246882793)
seg (db=Seg db_id=seg from=378 to=390)
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CARSLU_2_11
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(12251..13369)
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glycosyl transferase, group 1 family protein
rbh
glycosyl transferase, group 1 family protein
rbh
Glycosyl transferase, group 1 family protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT5_STALH (db=UNIREF evalue=0.0 bit_score=726.0 identity=100.0 coverage=99.4638069705094)
seg (db=Seg db_id=seg from=154 to=169)
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CARSLU_2_12
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(13396..13719)
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MazG nucleotide pyrophosphohydrolase n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT4_STALH (db=UNIREF evalue=2.0e-56 bit_score=221.0 identity=100.0 coverage=98.1481481481482)
nucleotide pyrophosphohydrolase
coiled-coil (db=Coil db_id=coil from=30 to=51 evalue=NA)
Predicted pyrophosphohydrolase, MazG-related, YpjD type (db=HMMPIR db_id=PIRSF029904 from=1 to=107 evalue=6.0e-74 interpro_id=IPR012359 interpro_description=NTP pyrophosphohydrolase MazG-related, YpjD)
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CARSLU_2_13
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(13889..14584)
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metal-dependent peptidase
metal-dependent peptidase
seg (db=Seg db_id=seg from=1 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=201 to=223)
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CARSLU_2_14
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(14630..15226)
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hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT2_STALH (db=UNIREF evalue=2.0e-93 bit_score=344.0 identity=98.48 coverage=98.9949748743718)
seg (db=Seg db_id=seg from=9 to=29)
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CARSLU_2_15
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(15230..15796)
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Putative uncharacterized protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT1_STALH (db=UNIREF evalue=3.0e-104 bit_score=380.0 identity=100.0 coverage=98.9417989417989)
hypothetical protein
rbh
hypothetical protein
rbh
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CARSLU_2_16
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(15814..16641)
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hypothetical protein
TPR-repeat-containing protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT0_STALH (db=UNIREF evalue=1.0e-148 bit_score=528.0 identity=99.27 coverage=99.2753623188406)
seg (db=Seg db_id=seg from=95 to=105)
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083:SF15 from=5 to=264 evalue=9.2e-23)
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CARSLU_2_17
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(16587..17072)
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TPR-repeat-containing protein n=2 Tax=Staphylococcus lugdunensis RepID=D3QCT0_STALH (db=UNIREF evalue=2.0e-59 bit_score=231.0 identity=100.0 coverage=69.7530864197531)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=109 to=115 evalue=NA)
seg (db=Seg db_id=seg from=114 to=131)
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CARSLU_2_18
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(17076..17780)
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3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Staphylococcus lugdunensis RepID=D3QCS9_STALH (db=UNIREF evalue=2.0e-131 bit_score=471.0 identity=100.0 coverage=99.1489361702128)
5-Enolpyruvylshikimate-3-phosphate synthase AroF (EC:2.5.1.19)
EPSP_SYNTHASE_2 (db=PatternScan db_id=PS00885 from=143 to=161 evalue=0.0 interpro_id=IPR023193 interpro_description=3-phosphoshikimate 1-carboxyvinyltransferase, conserved site)
no description (db=Gene3D db_id=G3DSA:3.65.10.10 from=18 to=229 evalue=5.9e-61 interpro_id=IPR001986 interpro_description=Enolpyruvate transferase domain GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
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CARSLU_2_19
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(18429..19493)
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3-dehydroquinate synthase n=2 Tax=Staphylococcus lugdunensis RepID=D3QCS8_STALH (db=UNIREF evalue=0.0 bit_score=721.0 identity=99.72 coverage=99.4366197183099)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase (EC:4.2.3.4)
aroB: 3-dehydroquinate synthase (db=HMMTigr db_id=TIGR01357 from=12 to=346 evalue=5.3e-126 interpro_id=IPR016037 interpro_description=3-dehydroquinate synthase AroB GO=Molecular Function: 3-dehydroquinate synthase activity (GO:0003856), Cellular Component: cytoplasm (GO:0005737), Biological Process: aromatic amino acid family biosynthetic process (GO:0009073))
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CARSLU_2_20
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(21120..21644)
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Nucleoside diphosphate kinase n=1 Tax=Staphylococcus lugdunensis M23590 RepID=E6M7F7_STALU (db=UNIREF evalue=1.0e-97 bit_score=358.0 identity=99.43 coverage=98.8571428571429)
ndk; putative nucleoside diphosphate kinase
ndk; putative nucleoside diphosphate kinase
NDP_KINASES (db=PatternScan db_id=PS00469 from=137 to=145 evalue=0.0 interpro_id=IPR023005 interpro_description=Nucleoside diphosphate kinase, active site)
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CARSLU_2_21
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(21712..22065)
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Heptaprenyl diphosphate synthase component II n=2 Tax=Staphylococcus lugdunensis RepID=D3QCS5_STALH (db=UNIREF evalue=1.0e-61 bit_score=238.0 identity=98.29 coverage=98.3050847457627)
putative heptaprenyl diphosphate synthase component II
HEPTAPRENYL DIPHOSPHATE SYNTHASE COMPONENT II (db=HMMPanther db_id=PTHR12001:SF16 from=1 to=115 evalue=6.1e-35)
GERANYLGERANYL PYROPHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR12001 from=1 to=115 evalue=6.1e-35 interpro_id=IPR017446 interpro_description=Polyprenyl synthetase-related)
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CARSLU_2_22
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(22717..23442)
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Demethylmenaquinone methyltransferase n=4 Tax=Staphylococcus RepID=D3QCS4_STALH (db=UNIREF evalue=1.0e-141 bit_score=505.0 identity=100.0 coverage=99.1735537190083)
menH; putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC:2.1.1.-)
rbh
menH; putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC:2.1.1.-)
rbh
UBIE_1 (db=PatternScan db_id=PS01183 from=22 to=37 evalue=0.0 interpro_id=IPR023576 interpro_description=UbiE/COQ5 methyltransferase, conserved site GO=Molecular Function: methyltransferase activity (GO:0008168))
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CARSLU_2_23
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(23455..24021)
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Putative component A of hexaprenyl diphosphate synthase n=2 Tax=Staphylococcus lugdunensis RepID=D3QCS3_STALH (db=UNIREF evalue=5.0e-103 bit_score=376.0 identity=100.0 coverage=98.9417989417989)
hypothetical protein
rbh
hypothetical protein
rbh
Uncharacterized protein n=5 Tax=Staphylococcus lugdunensis RepID=K8N9J3_STALU
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CARSLU_2_24
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(24297..24569)
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hup; DNA-binding protein HU
DNA-binding protein HU n=104 Tax=Staphylococcus RepID=DBH_STAAC (db=UNIREF evalue=8.0e-42 bit_score=172.0 identity=95.56 coverage=97.8021978021978)
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=6.0e-51 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
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CARSLU_2_25
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(24739..25737)
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Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Staphylococcus lugdunensis RepID=D3QCS1_STALH (db=UNIREF evalue=0.0 bit_score=680.0 identity=99.7 coverage=99.3993993993994)
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
NAD_G3PDH (db=PatternScan db_id=PS00957 from=189 to=210 evalue=0.0 interpro_id=IPR006168 interpro_description=Glycerol-3-phosphate dehydrogenase, NAD-dependent GO=Molecular Function: glycerol-3-phosphate dehydrogenase [NAD+] activity (GO:0004367), Biological Process: glycerol-3-phosphate metabolic process (GO:0006072), Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331), Biological Process: oxidation-reduction process (GO:0055114))
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CARSLU_2_26
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(25755..26150)
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GTP-binding protein EngA
GTPase Der n=102 Tax=Staphylococcus RepID=DER_STAA1 (db=UNIREF evalue=3.0e-68 bit_score=260.0 identity=93.89 coverage=98.4848484848485)
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=1 to=131 evalue=5.3e-55)
GTP-BINDING PROTEIN ENGA (db=HMMPanther db_id=PTHR11649:SF5 from=1 to=131 evalue=5.3e-55 interpro_id=IPR016484 interpro_description=GTP-binding protein EngA GO=Molecular Function: GTP binding (GO:0005525))
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CARSLU_2_27
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(26131..27069)
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putative GTPase
GTPase Der n=102 Tax=Staphylococcus RepID=DER_STAA1 (db=UNIREF evalue=7.0e-130 bit_score=467.0 identity=93.52 coverage=93.2907348242811)
seg (db=Seg db_id=seg from=145 to=157)
seg (db=Seg db_id=seg from=289 to=306)
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CARSLU_2_28
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(27243..28421)
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putative 30S ribosomal protein S1
putative 30S ribosomal protein S1
30S ribosomal protein S1 n=19 Tax=Staphylococcus RepID=RS1_STAEQ (db=UNIREF evalue=3.0e-177 bit_score=625.0 identity=88.01 coverage=99.4910941475827)
seg (db=Seg db_id=seg from=22 to=33)
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CARSLU_2_29
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(28704..29363)
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Cytidylate kinase n=2 Tax=Staphylococcus lugdunensis RepID=D3QCR8_STALH (db=UNIREF evalue=1.0e-122 bit_score=442.0 identity=100.0 coverage=99.0909090909091)
Cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase (EC:2.7.4.14)
cmk: cytidylate kinase (db=HMMTigr db_id=TIGR00017 from=2 to=215 evalue=2.3e-83 interpro_id=IPR003136 interpro_description=Cytidylate kinase GO=Molecular Function: cytidylate kinase activity (GO:0004127), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase-containing compound metabolic process (GO:0006139))
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CARSLU_2_30
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
29440..30408
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L-asparaginase n=2 Tax=Staphylococcus lugdunensis RepID=D3QCR7_STALH (db=UNIREF evalue=0.0 bit_score=653.0 identity=99.38 coverage=99.3808049535604)
putative L-asparaginase (EC:3.5.1.1)
rbh
putative L-asparaginase (EC:3.5.1.1)
rbh
ASN_GLN_ASE_1 (db=PatternScan db_id=PS00144 from=6 to=14 evalue=0.0 interpro_id=IPR020827 interpro_description=Asparaginase/glutaminase, conserved site GO=Biological Process: cellular amino acid metabolic process (GO:0006520))
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