name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_20cm_4_scaffold_1_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..769
----------------- DNA (768bp) protein (256aa) |
YD repeat protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQZ0_DELAS
rbh
YD repeat protein {ECO:0000313|EMBL:ABX32945.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM
YD repeat-containing protein
|
|
13_1_20cm_4_scaffold_1_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1966..2829
----------------- DNA (864bp) protein (288aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY8_DELAS
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32943.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2898..4226)
----------------- DNA (1329bp) protein (443aa) |
Sulfatase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY7_DELAS
rbh
Sulfatase {ECO:0000313|EMBL:ABX32942.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 /
sulfatase
rbh
|
|
13_1_20cm_4_scaffold_1_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4312..5289)
----------------- DNA (978bp) protein (326aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY6_DELAS
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32941.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5392..5907
----------------- DNA (516bp) protein (172aa) |
Transcriptional regulator, MarR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY5_DELAS
rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABX32940.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
MarR family transcriptional regulator
|
|
13_1_20cm_4_scaffold_1_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5929..7362)
----------------- DNA (1434bp) protein (478aa) |
Aldehyde Dehydrogenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY4_DELAS
rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ABX32939.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strai
aldehyde dehydrogenase
|
|
13_1_20cm_4_scaffold_1_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7379..8188)
----------------- DNA (810bp) protein (270aa) |
2-dehydro-3-deoxyglucarate aldolase {ECO:0000313|EMBL:ABX32938.1}; EC=4.1.2.20 {ECO:0000313|EMBL:ABX32938.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY3_DELAS
rbh
|
|
13_1_20cm_4_scaffold_1_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8200..9387)
----------------- DNA (1188bp) protein (396aa) |
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=883100 species="Bacteria; Proteobacter
L-rhamnonate dehydratase n=3 Tax=Delftia acidovorans RepID=RHMD_DELAS
rbh
mandelate racemase/muconate lactonizing protein
|
|
13_1_20cm_4_scaffold_1_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9417..10712)
----------------- DNA (1296bp) protein (432aa) |
Major facilitator superfamily MFS_1 n=2 Tax=Delftia RepID=A9BQY1_DELAS
rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEF87338.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (
major facilitator superfamily protein
|
|
13_1_20cm_4_scaffold_1_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10917..11936
----------------- DNA (1020bp) protein (340aa) |
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY0_DELAS
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX32935.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator
|
|
13_1_20cm_4_scaffold_1_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11924..13330)
----------------- DNA (1407bp) protein (469aa) |
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQX9_DELAS
rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ABX32934.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
transcriptional regulator
|
|
13_1_20cm_4_scaffold_1_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13449..14738
----------------- DNA (1290bp) protein (430aa) |
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=398578 sp
hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.88)
3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative n=2 Tax=cellular organisms RepID=B9TFK3_RICCO
rbh
|
|
13_1_20cm_4_scaffold_1_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14780..15205
----------------- DNA (426bp) protein (142aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQX7_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX32932.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15207..16589
----------------- DNA (1383bp) protein (461aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQX6_DELAS
rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32931.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
rbh
|
|
13_1_20cm_4_scaffold_1_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16756..17832
----------------- DNA (1077bp) protein (359aa) |
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D50B57
rbh
Magnesium chelatase {ECO:0000313|EMBL:EPD43418.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 1583
Mg chelatase subunit ChlI
|
|
13_1_20cm_4_scaffold_1_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18641..19663)
----------------- DNA (1023bp) protein (341aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVF8_DELAC
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43421.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
retron reverse transcriptase
|
Around here begins a large change in GC content and repeats >17 incidence, continues to ~58 kbp
Jill Banfield
(9/24/21)
|
13_1_20cm_4_scaffold_1_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19626..19934)
----------------- DNA (309bp) protein (103aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZN6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43420.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
helix-turn-helix domain-containing protein
|
|
13_1_20cm_4_scaffold_1_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19982..20215)
----------------- DNA (234bp) protein (78aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XV68_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43419.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21085..24498)
----------------- DNA (3414bp) protein (1138aa) |
ligD; ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase D n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDV7_DELAC
rbh
DNA ligase D {ECO:0000313|EMBL:EPD43422.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
|
|
13_1_20cm_4_scaffold_1_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24503..24685)
----------------- DNA (183bp) protein (61aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUE5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH09350.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24712..25626)
----------------- DNA (915bp) protein (305aa) |
Probable DNA repair protein HMPREF9702_02205 n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XV76_DELAC
rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
ku protein
|
|
13_1_20cm_4_scaffold_1_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25808..26098
----------------- DNA (291bp) protein (97aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZP4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43425.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
|
|
13_1_20cm_4_scaffold_1_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26205..26474)
----------------- DNA (270bp) protein (90aa) |
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVG5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43426.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
|
|
13_1_20cm_4_scaffold_1_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26903..27094)
----------------- DNA (192bp) protein (64aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDW4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43427.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27964..28467)
----------------- DNA (504bp) protein (168aa) |
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WUF0_DELAC
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43428.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
putative outer membrane protein
|
|
13_1_20cm_4_scaffold_1_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29278..31248)
----------------- DNA (1971bp) protein (657aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XV82_DELAC
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43429.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_27
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31544..32707)
----------------- DNA (1164bp) protein (388aa) |
PREDICTED: zinc-type alcohol dehydrogenase-like protein C1198.01-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C162E7
rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACM31806.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
alcohol dehydrogenase groes domain-containing protein
|
|
13_1_20cm_4_scaffold_1_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34915..35523)
----------------- DNA (609bp) protein (203aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVH1_DELAC
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43431.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
|
|
13_1_20cm_4_scaffold_1_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35901..36809)
----------------- DNA (909bp) protein (303aa) |
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDW9_DELAC
rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43432.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
transglutaminase domain-containing protein
|
|
13_1_20cm_4_scaffold_1_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37062..39458
----------------- DNA (2397bp) protein (799aa) |
catalase (EC:1.11.1.6)
Catalase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUF3_DELAC
rbh
Catalase {ECO:0000313|EMBL:EPD43433.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
|