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CARPEP_2_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
LysR family transcriptional regulator similarity KEGG
DB: KEGG
27.6 315.0 121 4.30e-25 seu:SEQ_1628
seg (db=Seg db_id=seg from=65 to=85) iprscan interpro
DB: Seg
null null null null seu:SEQ_1628
seg (db=Seg db_id=seg from=154 to=165) iprscan interpro
DB: Seg
null null null null seu:SEQ_1628
(db=HMMPfam db_id=PF00126 from=3 to=63 evalue=2.5e-14 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 2.50e-14 seu:SEQ_1628
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=91 evalue=7.6e-14) iprscan interpro
DB: superfamily
null null null 7.60e-14 seu:SEQ_1628
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=89 evalue=1.1e-10 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.10e-10 seu:SEQ_1628
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=88 to=301 evalue=2.7e-08) iprscan interpro
DB: superfamily
null null null 2.70e-08 seu:SEQ_1628
HTHLYSR (db=FPrintScan db_id=PR00039 from=19 to=30 evalue=1.0e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.00e-07 seu:SEQ_1628
HTHLYSR (db=FPrintScan db_id=PR00039 from=40 to=51 evalue=1.0e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.00e-07 seu:SEQ_1628
HTHLYSR (db=FPrintScan db_id=PR00039 from=30 to=40 evalue=1.0e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.00e-07 seu:SEQ_1628
(db=HMMPfam db_id=PF03466 from=119 to=250 evalue=1.3e-05 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 1.30e-05 seu:SEQ_1628
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=57 evalue=21.563 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.16e+01 seu:SEQ_1628
LysR family transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis 1-13 RepID=UPI000289D369 similarity UNIREF
DB: UNIREF90
100.0 null 615 1.00e-173 seu:SEQ_1628
LysR substrate binding domain protein {ECO:0000313|EMBL:EFR30589.1}; TaxID=908337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Eremococcus.;" source="Eremococcus coleocola A UNIPROT
DB: UniProtKB
29.7 320.0 133 5.40e-28 E4KQS9_9LACT