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CARPEP_2_17

Organism: Peptoniphilus sp. Carrol

near complete RP 53 / 55 MC: 15 BSCG 51 / 51 ASCG 0 / 38
Location: 20711..21061

Top 3 Functional Annotations

Value Algorithm Source
HTH transcriptional regulator, ArsR family similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 119.0
  • Bit_score: 116
  • Evalue 6.80e-24
HTH_ARSR_1 (db=PatternScan db_id=PS00846 from=55 to=73 evalue=0.0 interpro_id=IPR018334 interpro_description=Transcription regulator ArsR, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
no description (db=HMMSmart db_id=SM00418 from=32 to=110 evalue=5.2e-31 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.20e-31

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Taxonomy

Peptoniphilus harei → Peptoniphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
ATGAAGGAAAAATATATAGACGAAGTTTCGAAGGATGTTGAAGAAGACATATTAAGTTTTAACGAAAAAGAAAAGTTAATAGATTTGATTTCACAAATATTTAAAGCATTATCAGATCCAACTAGGATAAAAATAATCTATGCGTTGATGAAGGGACCACTTTGCGTTTCCGACATTTCAGTTTTGCTTGATATGAGTCAATCTTCAATATCGCATCAACTTGCATTACTTAGAAGCCAAAGCTTAATAAAGGTCAAGAGAAGGGGAAGACGTGCATATTATTCTCTTGACGATGAACATGTTCTTTCCATATTTAAAGATGGATTGGAACATGCAGAACATAAAATATAA
PROTEIN sequence
Length: 117
MKEKYIDEVSKDVEEDILSFNEKEKLIDLISQIFKALSDPTRIKIIYALMKGPLCVSDISVLLDMSQSSISHQLALLRSQSLIKVKRRGRRAYYSLDDEHVLSIFKDGLEHAEHKI*