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SCNpilot_BF_INOC_scaffold_1503

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1503_1
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(58..966)
DNA (909bp) protein (303aa)
TniB n=1 Tax=Curvibacter lanceolatus RepID=UPI00035DA1A8
TniB family protein
NTP-binding protein TniB (Tn6048) {ECO:0000313|EMBL:ABF11835.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia
SCNpilot_BF_INOC_scaffold_1503_2
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(969..2651)
DNA (1683bp) protein (561aa)
transposase TniA n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959388
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABO60116.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia com
SCNpilot_BF_INOC_scaffold_1503_3
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2882..3094
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q3BT38_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ24021.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_BF_INOC_scaffold_1503_4
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3087..4235
DNA (1149bp) protein (383aa)
HsdFM n=1 Tax=Achromobacter denitrificans RepID=T2K1C8_ACHDE
HsdFM {ECO:0000313|EMBL:CCU56617.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitrificans (Alcaligen
C-5 cytosine-specific DNA methylase
SCNpilot_BF_INOC_scaffold_1503_5
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4235..5164
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Achromobacter denitrificans RepID=T2K1A2_ACHDE
Uncharacterized protein {ECO:0000313|EMBL:CCU56618.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitr
hypothetical protein
SCNpilot_BF_INOC_scaffold_1503_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5161..5571
DNA (411bp) protein (137aa)
DNA mismatch endonuclease of very short patch repair n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A8A4_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI78380.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
DNA mismatch endonuclease vsr
SCNpilot_BF_INOC_scaffold_1503_7
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5708..6691)
DNA (984bp) protein (328aa)
Trypsin domain-containing protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD6_PSEAI
trypsin domain-containing protein
Trypsin domain protein {ECO:0000313|EMBL:AAU92378.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus cap
SCNpilot_BF_INOC_scaffold_1503_8
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6678..6899)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN14_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFJ90151.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
SCNpilot_BF_INOC_scaffold_1503_9
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6967..9027)
DNA (2061bp) protein (687aa)
Mobilization protein n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 RepID=U6QQI3_SALET
mobL; mobilization protein
Mobilization protein {ECO:0000313|EMBL:ABI93471.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrifi
SCNpilot_BF_INOC_scaffold_1503_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9226..9537
DNA (312bp) protein (104aa)
MobC n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 RepID=U6QUD7_SALET
Uncharacterized protein {ECO:0000313|EMBL:KJW76573.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae compl
mobilization protein C
SCNpilot_BF_INOC_scaffold_1503_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9571..12108
DNA (2538bp) protein (846aa)
TraG n=1 Tax=Pseudomonas aeruginosa RepID=M1RSX5_PSEAI
TraG {ECO:0000313|EMBL:AGG19206.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer protein TraG
SCNpilot_BF_INOC_scaffold_1503_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12123..12491
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1DQG5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKH45393.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
SCNpilot_BF_INOC_scaffold_1503_13
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12584..13054)
DNA (471bp) protein (157aa)
Putative endonuclease n=1 Tax=Thauera sp. 28 RepID=N6YFD0_9RHOO
nuclease Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
nuclease
SCNpilot_BF_INOC_scaffold_1503_14
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13051..13962)
DNA (912bp) protein (304aa)
KfrA protein n=1 Tax=Pseudomonas aeruginosa RepID=A7MAI0_PSEAI
KfrA protein {ECO:0000313|EMBL:AJW29861.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
kfrA; transcriptional regulator KfrA
SCNpilot_BF_INOC_scaffold_1503_15
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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comp(14870..15199)
DNA (330bp) protein (110aa)
TrfA transcriptional repressor protein, putative n=1 Tax=Ricinus communis RepID=B9TFM5_RICCO
TrfA transcriptional repressor protein, putative {ECO:0000313|EMBL:EEF25340.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eud
TrfA family protein
Displaying 15 items

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