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SCNpilot_BF_INOC_scaffold_2071_8

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(6575..7204)

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 210.0
  • Bit_score: 412
  • Evalue 2.90e-112
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 209.0
  • Bit_score: 409
  • Evalue 3.50e-111
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 209.0
  • Bit_score: 399
  • Evalue 5.60e-109

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTAATCTTGATCCCAAATGCCGTCAGTGCCGTCGTGAGGGCGAAAAGCTCTTTCTGAAAGGCGAGAAGTGCTTTACCGACAAATGCGCGATTGAACGTCGTGCCTATGCGCCTGGTCAGCATGGCCAGAAGAGCGGTGCACGCCTCTCCGGTTACGGCGTGCAACTGCGTGAAAAGCAAAAAATCCGCCGCATCTACGGCGTGCTGGAAGGCCAGTTCCGTCTGACCTACAAACGCGCTGAAAGCCGCAAGGGTGTGACCGGTGAAAACCTGTTGTCCATGCTCGAATCGCGTCTGGATTCGGTGTGCTACCGCATGGGCTTTGGCGCGTCGCGTACCGAGGCGCGTCAGGTGGTCCGCCACAACGGCATCACCGTGAACGGTCGCCGGGTCAATATCCCGTCGTATCAGGTTCGCGCAGGCGATGTGGTCGAGGTGGTGGACAAGGCGAAAGCCCATCTGCGTATCAAGGCGGCTGCCGAAGCGACCGCAGCGCGCGGCTATCCTGAATGGGTCGAGGTCGATGCGAAGGCGCTCAAGGGCACTTACAAAGCGGCCCCGCAACGCTCGGAACTGCCGTCGACGATCAATGAGTCGCTGGTCGTCGAGTTGTACTCCAAATAA
PROTEIN sequence
Length: 210
MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSGYGVQLREKQKIRRIYGVLEGQFRLTYKRAESRKGVTGENLLSMLESRLDSVCYRMGFGASRTEARQVVRHNGITVNGRRVNIPSYQVRAGDVVEVVDKAKAHLRIKAAAEATAARGYPEWVEVDAKALKGTYKAAPQRSELPSTINESLVVELYSK*