ggKbase home page

SCNpilot_BF_INOC_scaffold_1252_4

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 1879..2571

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2E3_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 230.0
  • Bit_score: 359
  • Evalue 2.50e-96
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 229.0
  • Bit_score: 361
  • Evalue 1.20e-96
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 230.0
  • Bit_score: 359
  • Evalue 7.00e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 693
ATGCCAAAAAGAGGTAAAGCTTATCAAGAGTCAGAAAAGTTAGTTGAAAGAAACAGACTTTATGATGTTGATGAAGCATTAAAATTAGTTAAGCAAACTGCAAAAGCTAAATTTGATGAGACTGTTGAACTTCACATCAAATTAGGTGTTGATGGTAGACATGCTGATCAACAAGTTAGAGGCGCTATCGTTTTACCACACGGTACTGGTAAAACTAAAAGAGTTCTTGTTATCGCTAAAGGCGAAAAAGCTGCTGAAGCTGAAAAAGCTGGCGCTGATTTCGTAGGCGCAGAGGACATTATCACAAAAATCCAAAACGAAAACTGGTTTGACTATGATGTTATCGTTTCTACACCTGACATGATGGGTCAATTAGGTCGTTTGGGTAGAGTTTTAGGTCCTAAAGGTTTGATGCCAAACCCTAAATCTGGTACCGTAACATTTGATCTTGAAAGAGCAGTTAACGAAATCAAAGCTGGTAAAGTTGAGTACAGACTTGATAAAACAAATATTGTACACGTCTCTATCGGAAAAGCTTCTTTTGATGAAGTTAAATTATCTGAAAACTTAAGCGCATTGATCGATGCAGTTGTTAAAGCTAAACCAGCTGCTGCAAAAGGAACTTATTTAAGAAGCGTAACGCTTTCTAGTACGATGGGTCCTGGAATTAAGCTCAATGCTGCAAAATTATAA
PROTEIN sequence
Length: 231
MPKRGKAYQESEKLVERNRLYDVDEALKLVKQTAKAKFDETVELHIKLGVDGRHADQQVRGAIVLPHGTGKTKRVLVIAKGEKAAEAEKAGADFVGAEDIITKIQNENWFDYDVIVSTPDMMGQLGRLGRVLGPKGLMPNPKSGTVTFDLERAVNEIKAGKVEYRLDKTNIVHVSIGKASFDEVKLSENLSALIDAVVKAKPAAAKGTYLRSVTLSSTMGPGIKLNAAKL*