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SCNpilot_BF_INOC_scaffold_17_42

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 47773..48792

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid ABC transporter system permease protein LivM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZH5_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 329.0
  • Bit_score: 378
  • Evalue 9.90e-102
livM1; high-affinity branched-chain amino acid ABC transporter system permease LivM similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 329.0
  • Bit_score: 378
  • Evalue 2.80e-102
High-affinity branched-chain amino acid ABC transporter system permease protein LivM {ECO:0000313|EMBL:AFS78187.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 329.0
  • Bit_score: 378
  • Evalue 1.40e-101

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAACAATAAGATGTTGAAAAATTACGCAATCAACCTTGCTGTGGTGATTTTAATATTCACTGGTTTAATGGGTATGATGGCAACGGGGATGCTAAATAAATACCACCAGGGTATTATTATTTTTATTCTTATCAATGTAATTCTAGCGAGTAGCTTGAATTTAGTAACAGGCTTCCTTGGTCAATTGACCTTAGGTCATGCTGGCTTTATGGCTGTTGGTGCATATGCCTCTGCTCTATTTTCAGTGGCGTTAAAGGGACAAATGCCTAATTTACTATTATTGATAATCAGCTTGATCATCGGTGGTATAGCAGCAAGCATCGTTGGAATTGTCATTGGTATTCCTGCACTTAGGCTTAGAGGTGATTATCTTGCTATTATTACCTTAGGGTTTGGTGAGGTTATACGAGTTGTAATTAATAATATTAAAATAACTGGCGGTGCACAGGGTCTAACTGGTATCCCGAGAATTGCGTCGTTTCAAAGTGCATTTTGGATTGCAGCTTTAGTCATACTAGTGCTTTACAGATTAACACATTCTAAGCAGGGAAGAGCCATTCTTTCCATAAGGGAAGATGAGGTTGCAGCAGAGGCAGTTGGTGTAAGGACGACCTATTACAAGGTATTAGGTTTTGCAATCGCAGCTGGATTCGCAGGTGTAGGCGGTGGGTTATACGCACACTACATTGCTTTTCTTGATCCAAATACGTTTGGATTTATGAGATCGGTTGAAATCTTAGTTATCGTCGTACTCGGTGGAATGGGAAGCTTAACTGGAACTATTGTTGCTGCAACTGTTTTAACGATCTTACCAGAGGCGTTAAGAGGTTTCTCAGATTTTAGAATGCTTTTATATTCATTTATGTTAATTGTCATGATGCTTTTTAGACCACAGGGATTATTTGGAACAGGAGAGTTTTCATGGCAAACATTATATGATCGAACAAAGTTGGTTCACTCTGCATTAAGAAAAAGAGAGAAAAGGGGGGGAATCGATGGCTCTACTGGAAGCAAATAA
PROTEIN sequence
Length: 340
MNNKMLKNYAINLAVVILIFTGLMGMMATGMLNKYHQGIIIFILINVILASSLNLVTGFLGQLTLGHAGFMAVGAYASALFSVALKGQMPNLLLLIISLIIGGIAASIVGIVIGIPALRLRGDYLAIITLGFGEVIRVVINNIKITGGAQGLTGIPRIASFQSAFWIAALVILVLYRLTHSKQGRAILSIREDEVAAEAVGVRTTYYKVLGFAIAAGFAGVGGGLYAHYIAFLDPNTFGFMRSVEILVIVVLGGMGSLTGTIVAATVLTILPEALRGFSDFRMLLYSFMLIVMMLFRPQGLFGTGEFSWQTLYDRTKLVHSALRKREKRGGIDGSTGSK*