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SCNpilot_BF_INOC_scaffold_17_213

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 234272..234838

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, RpoE n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1K0_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 177
  • Evalue 1.40e-41
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 177
  • Evalue 4.00e-42
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:AEV69215.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium c similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 177
  • Evalue 2.00e-41

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Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGAATCAATGCTCATCGAAAAAAGCGTCCAGGGAGATGTTGAGAGCTTTGAAAAACTCATTGTTAAGTACAATAGATATGTTTATAATATTGCATTTAGAATGATGGGCAATGAAGAGGATGCTAAGGACATGTCGCAGGAGACCTTAATTAAGGCTTTTAAAGCGATTGGTCAATTTAAAATGGAATCAAATTTTTCTACTTGGTTGTACAGAATAACGATTAATGTTTGCAAGGATGAACTAAGAAAACGAAAAGAAACCGTTTTGTCTTATGATGCGCCTTTAAATGAAGATGAAGTGACTTTGAAGGATACGCTAAAGGATGAAACCTACAATCCATTATTGATTTATGAAAAGCTTGAGTTAAGGTCTTCTATTGAAAATGCTTTAAATCAGCTTTCTGAAGACAGCAAGTCCGTGGTAATCCTCAAGGATATTATGGGTTACTCTTATGAAGAAATTGGTGCTATTTTGGAGATACCAATAGGGACAGTAAGGTCTCGACTGAATCGAAGTCGAACCACCCTTAAGAATATCTTACAAATTCAACTATCAGAGAATTAG
PROTEIN sequence
Length: 189
MESMLIEKSVQGDVESFEKLIVKYNRYVYNIAFRMMGNEEDAKDMSQETLIKAFKAIGQFKMESNFSTWLYRITINVCKDELRKRKETVLSYDAPLNEDEVTLKDTLKDETYNPLLIYEKLELRSSIENALNQLSEDSKSVVILKDIMGYSYEEIGAILEIPIGTVRSRLNRSRTTLKNILQIQLSEN*