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SCNpilot_BF_INOC_scaffold_17_229

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 249220..249894

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein Amet_2289 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=Y2289_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 223.0
  • Bit_score: 228
  • Evalue 6.40e-57
DNA repair protein RadC {ECO:0000313|EMBL:KJF27973.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 223.0
  • Bit_score: 229
  • Evalue 5.30e-57
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 223.0
  • Bit_score: 228
  • Evalue 1.80e-57

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 675
ATGATAAAAAATATTCCTGCTACTGAGCAGCCAAGAGAACGTATGTTAAACTATGGTGCAACCGCACTTACTATTTCTGAACTACTCGCTATTTTACTTAGAACGGGTAGTAAAAAGAAATCAGCTTTAGAACTAGGTCAATACATGGCAAGTCAATTTGAGTCTAATTTGTCTGATCTGTCTCAGATTACAATAGAAGAGCTTTGCAAAATTGACGGTATTGGGACGACTAAAGCCACACAGATTATAGCCGCCATAGAACTTGGTAAAAGAATTAAGCAATCAGCAGGAATTAAGGGCTTTAAGCTCACTTCTCCAAGTGAGGTTACACATTTTTTTTATGCAGAGCTTGCACTTGAAAAGGTTGAAAAATTTGTCGTCGTCATGTTAAATACAAAGAATGAAGTAATTAATTGGGAAGTGATTTCCATTGGTAGTTTAAATGCCTCAATTGTTCATCCAAGAGAGGTATTTAATAGTGCTATAAAAAGAAGTGCAGCATCTATTATTGCAATTCACAATCATCCATCTGGGACCGTTTCACCCAGTAAAGAGGATGTGCTTATAACTAAACGTTTGGAGGAATGTGGTCAACTATTGGGAATTCCGCTTATTGACCATTTAATTATCGGAAAAGATAACTATTTTAGCTTTAAAGAAAGCAATCAACTATAA
PROTEIN sequence
Length: 225
MIKNIPATEQPRERMLNYGATALTISELLAILLRTGSKKKSALELGQYMASQFESNLSDLSQITIEELCKIDGIGTTKATQIIAAIELGKRIKQSAGIKGFKLTSPSEVTHFFYAELALEKVEKFVVVMLNTKNEVINWEVISIGSLNASIVHPREVFNSAIKRSAASIIAIHNHPSGTVSPSKEDVLITKRLEECGQLLGIPLIDHLIIGKDNYFSFKESNQL*