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SCNpilot_BF_INOC_scaffold_60_1

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 227..916

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUI6_TEPAE similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 219.0
  • Bit_score: 227
  • Evalue 1.10e-56
Transcriptional regulator {ECO:0000313|EMBL:KDR94202.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litora similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 221.0
  • Bit_score: 253
  • Evalue 3.50e-64
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 212.0
  • Bit_score: 252
  • Evalue 9.20e-65

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Taxonomy

[Clostridium] litorale → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGGATCTTTTTGATCAGAAAAAAGAAAACAAATCTTTAACATCGCTTATTTTCGAGAAAATTCGTGAGGACATCTTAAATGGTAGATATGCAACCGGCGACAAGTTAGTTGAAATTAAACTAGCAGATGAACTTGGTGTAAGTAGAACGCCGGTTAGAGAGGCGTTAAAGCAGCTAGAGTTGGATGGTCTAGTTGAAAATATTCCAAATCGTGGTGTTGTAGTAAAAGGTATCAGCAAAAAGGATATTGATGACATATTGACCATAAGGCTATGCATTGAGGGATTAGTTGGCCAGTGGGCAGCTGAAAGAATACTAGATCATGAGGTAAAAGAGCTAGAGGAAATCTTTGATTTAATGGAGTTTTATTCGCAAAAAGGCGATGTAGATAAAATATTTGAGCTTAATACAAAATTTCATGAAACATTATATCAGACGACAAAAAGCAGATATCTTGAAGGGGTTTTAAATGATTTTCAATTGTTTATTAAAACAGCAAGAAACAGCTCTCTAAAATCGGAGGGTAGAATTCATAACGCTTTAGAAGAACATAGACAAATTGTTGCTGCATTGAAAAATCATGATGTTGAGGGAACAAGAAGAGCGCTTGTAAACCATATCGCAAATTCAAATCATAACATTAAGACAATCGTTCAAGAAGAAGAGATGAAACTAGCTAATGAGGAATAG
PROTEIN sequence
Length: 230
MDLFDQKKENKSLTSLIFEKIREDILNGRYATGDKLVEIKLADELGVSRTPVREALKQLELDGLVENIPNRGVVVKGISKKDIDDILTIRLCIEGLVGQWAAERILDHEVKELEEIFDLMEFYSQKGDVDKIFELNTKFHETLYQTTKSRYLEGVLNDFQLFIKTARNSSLKSEGRIHNALEEHRQIVAALKNHDVEGTRRALVNHIANSNHNIKTIVQEEEMKLANEE*